Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02-
16] 92 sequences; 29,140,916 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq73 113 4e-20
seq72 86.0 5e-12
>seq73
Length=6463649
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | || || || || |||| ||||| || || ||| |
Sbjct 2153659 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGC 2153600
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || | || ||||| || ||||||||||| ||||| ||||| ||
Sbjct 2153599 GATACTATCGACAATGTAAAGTCCAAAATCCAGGACAAGGAGGGAATTCCCCCCGACCAG 2153540
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || || ||||| || | || ||| ||||||| |||| ||||| |||
Sbjct 2153539 CAGCGCCTCATCTTCGCAGGCAAGCAACTTGAAGATGGCCGCACCCTCTCAGATTATAAC 2153480
Query 22399 ATTCAAAAAGAATCCAC 22415
|| || || ||||||||
Sbjct 2153479 ATCCAGAAGGAATCCAC 2153463
Score = 105 bits (116), Expect = 6e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || || |||| ||||| || || ||| |||||| | ||| || | ||
Sbjct 2153863 ACCGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAATGTAAAGTCC 2153804
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||| || ||||||||||| ||||| || || || || || || || || || |||||
Sbjct 2153803 AAAATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTCATCTTCGCAGGCAAG 2153744
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
|| | || ||| ||||||| |||| ||||| ||||| || || ||||||||
Sbjct 2153743 CAACTTGAAGATGGCCGCACCCTCTCAGATTATAACATCCAGAAGGAATCCAC 2153691
Score = 91.5 bits (100), Expect = 1e-13
Identities = 124/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||| ||||| || || ||| |||||| | ||| || | ||
Sbjct 2154145 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAATGTAAAGTCC 2154086
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
||||| || ||||||||||| ||||| ||||| || || || || || || || |||||
Sbjct 2154085 AAAATCCAGGACAAGGAGGGAATTCCCCCCGACCAGCAGCGCCTCATCTTCGCAGGCAAG 2154026
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
|| | || ||| |||||| | || || || ||||| || || ||||||||
Sbjct 2154025 CAACTTGAAGATGGTCGCACCTTGTCGGACTATAACATCCAGAAGGAATCCAC 2153973
>seq72
Length=3214209
Score = 86.0 bits (94), Expect = 5e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || ||||| || | || || || || || | | ||| ||| |
Sbjct 2114282 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 2114341
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| || || || || |||||||||||||| || || || || || ||
Sbjct 2114342 CGACAATGTCAAGACCAAGATCCAGGATAAGGAGGGTATTCCCCCTGACCAGCAGCGCCT 2114401
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || |||||||| ||| | |||||| ||||||| | ||| |||||||| || ||
Sbjct 2114402 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 2114461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727529379980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |