Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02- 16] 92 sequences; 29,140,916 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq73 150 2e-31 seq72 93.3 4e-14 seq2 91.5 1e-13 >seq73 Length=6463649 Score = 150 bits (166), Expect = 2e-31 Identities = 306/449 (68%), Gaps = 29/449 (6%) Strand=Plus/Minus Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461 |||| ||||||||| || ||||| | || || |||||| || ||| ||||||| | Sbjct 574287 TGGTTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCATTCGCCTCCATCTTCT 574228 Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521 | || | | ||| | |||||||| || || ||| ||||||| | || || || | Sbjct 574227 GGCTGAAGAAGCGTGGCTTGATGCCCGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTG 574168 Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCT------CTACTACAAGA-----CGCGCGT 52570 |||| || || ||||| ||||| || ||||| || | ||| || ||| | Sbjct 574167 ACGAGGGTCTCCACACTGACTTCGCTTGCCTGCTCTTCTCCCACATGAACCACCGCCCC- 574109 Query 52571 GACCGAAAAATTGGATTC-GGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTATCG 52629 |||| || || | ||| ||||| || ||| ||||| || | |||| Sbjct 574108 GACCCCAAGATCG--TTCAGGACATCAT--------TGTC----GAGGCCGTCGGCATCG 574063 Query 52630 AAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCA 52689 | ||||||| | || | ||| || || || || || ||||||||| | || | Sbjct 574062 AGCAGGAGTTCCTGACTGACGCTCTTCCCTGCGGTCTTCTTGGCATGAACTCCAAGCTGA 574003 Query 52690 TGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAG 52748 ||||||||||||| ||||| || || || || ||| ||||| ||||| || | | ||| Sbjct 574002 TGTGCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGG-CAACAAGAAG 573944 Query 52749 TACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACC 52808 |||| ||||||| ||| || || || || ||| | ||| || || | ||||||||| Sbjct 573943 TACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACC 573884 Query 52809 AACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837 ||||| ||||||||||| ||||| || || Sbjct 573883 AACTTCTTCGAGAAGCGTGTCGGTGACTA 573855 >seq72 Length=3214209 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 |||| || |||||||||||||||| || || |||||||| || || |||| ||| Sbjct 2114463 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 2114404 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAATTGT 138543 | || ||||| ||||| || || ||||| || || || ||| || | || |||| Sbjct 2114403 TCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTGGTCTTGACATTG- 2114345 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | ||||||| ||||||| || |||| || | || ||||| ||||| || || || Sbjct 2114344 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2114285 Query 138604 AAA 138606 ||| Sbjct 2114284 AAA 2114282 >seq2 Length=1012446 Score = 91.5 bits (100), Expect = 1e-13 Identities = 485/767 (63%), Gaps = 21/767 (3%) Strand=Plus/Plus Query 153810 CGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCG 153869 |||||||| |||||| | |||| || || ||||| || ||||| || || Sbjct 663524 CGGCCCTCCTGCTCGTACTTCACGTAAAGAGCGTCGAACTCATCACCGTAAACATCAGCC 663583 Query 153870 AGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGACGCGTCGC 153929 |||||||| || | || || | || | ||| | ||| ||| | || || | Sbjct 663584 AGGCCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTC 663643 Query 153930 ATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCG 153989 ||||| ||||| || ||| | ||||| | |||||| || || || | ||||| | Sbjct 663644 ATGAAGAGATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGC---GCGAACCTCCTCC 663700 Query 153990 C--CCATG----TTGCGTTTCAGATTGAGCA-CGCTATAGATGTCGGCGTGCCAGGGTTC 154042 || || ||||| ||||| ||| | | | | ||| ||||||||||| || || Sbjct 663701 TTACCGTGGTTCTTGCG---CAGATCGAGGAACTCGA-AGACATCGGCGTGCCATGGCTC 663756 Query 154043 AATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGATCGACGTGGCGCACCAT 154099 | ||||| || | |||||| ||||| || || || || || | ||| | | Sbjct 663757 CAGGTAGATAGCAAAGGCACCAGGGCGCTTGTTACCACCTTGGTCCACATAGCGTGCGGT 663816 Query 154100 ATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATTGAT 154159 || ||||| ||||||| ||| || | | ||| | | || ||||||||| | || Sbjct 663817 GTTATTGAACACGCGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAAT 663876 Query 154160 CTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCCGCCGTACTTTGA 154219 | ||| ||||| | | || || || | || || || || || ||| || Sbjct 663877 GTAAGAACCGGTAGCGCGAATGCGGTGGACATTCAAACCGATACCACCAGCGGTCTTGGA 663936 Query 154220 TATGGCAGCGCAGTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCC 154279 || || ||| || || |||||| || || ||||| || ||| ||| | Sbjct 663937 GATCATGGCACAGGTCTTGAGAGTATCGTAGATACCCTCAATGCTGTCCGCGCTCACGTC 663996 Query 154280 GAGCAAGAAACACGAACACATTTGCGGAATGCGCGTTCCCGCC--GAAAAGAGGGTGGGA 154337 | || ||| || || | || || | | || | || ||| |||| | |||| Sbjct 663997 AACCAGGAAGCAAGACGCAAGCTGAGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGA 664056 Query 154338 CTCGCGTGCGTAAACAGTTTTTGGCTCATCATGCGGTACGTTTCGATGGCGTCTTCGATA 154397 ||||| || || | || ||| ||||| | |||| || || ||||| | ||| ||| Sbjct 664057 G--GCGTGAGTGAAGAACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTTTCAATA 664114 Query 154398 TCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCATGTGCTGCGGACGTTCGGCGACT 154457 || ||||||||||| |||| || || ||||| |||| |||||| ||||| || || || Sbjct 664115 TCCTCGCCGTGAATTCCGACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACG 664174 Query 154458 CTATTGTCAATCTTCAAGAGATATCCATTTTCGAGGGTTTTGTAACCGAAATACTTGTAT 154517 | || |||| | || ||| | ||||| || ||| | ||||| | ||||| Sbjct 664175 TTGCCGTTAATCCGAAGAAGGTATGAACGCTCGAGAGTCTTGAATCCGAAGAAGTTGTAG 664234 Query 154518 TCAAAATCTAGCTCATGAGCGATGGCCGCATCGAGCGTCGCGGCATG 154564 | || || | || | | ||||||| | |||| ||||||| Sbjct 664235 TTGAAGTCACGGTCGTACACAATGGCCGAGTTGAGCTCTTCGGCATG 664281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261829298240