Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02- 16] 92 sequences; 29,140,916 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 185 3e-41 seq84 104 7e-17 seq4 91.5 4e-13 seq51 89.7 2e-12 >seq2 Length=1012446 Score = 185 bits (204), Expect = 3e-41 Identities = 567/874 (65%), Gaps = 7/874 (1%) Strand=Plus/Plus Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 ||||| || || ||||| ||| ||||| || || || || || | ||||||||| Sbjct 663353 CTGTACTCGACGATCTCGGTGCAAAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGG 663412 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 ||| || |||| ||||||||||| || || ||| | ||| | || ||||| |||| Sbjct 663413 TTACTCTTCTTGTTGCAAGCATCCTTATAGAGCATGAAGGGGTTACCAGTCTCAGTCTGG 663472 Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807 || || ||||| |||||| | | || || || |||| | | ||| ||| Sbjct 663473 GCCTCGAGAATGGCATACCAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCC 663532 Query 155808 GACTCATATTTCA--TATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAG 155865 ||| || |||| || | ||||| | | || ||||||||| |||| ||| || | Sbjct 663533 TGCTCGTACTTCACGTAAAGAGCGT--CGAACTCATCACCGTAAACATCAGCCAGGCCGG 663590 Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATA 155925 || || | |||||| || || | ||| || | ||||||| ||| || | Sbjct 663591 GGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGA 663650 Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGAT 155985 ||| | ||| | ||| ||||| ||||| | || |||||| | ||||| | Sbjct 663651 GATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCGCGAACCTCCTCCTTACCGTGGT 663710 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 |||| || || || | ||| || | ||| | || ||||||||| || ||||||| Sbjct 663711 TCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCATGGCTCCAGGTAGATAGCAA 663770 Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 | |||| | |||| ||||| || || ||||| || || || |||||||| || | Sbjct 663771 AGGCACCAGGGCGCTTGTTACCACCTTGGTCCACATAGCGTGCGGTGTTATTGAACACGC 663830 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 |||||||||| |||||| ||||| | ||| |||||||| | ||| | ||||| | | Sbjct 663831 GCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAG 663890 Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222 ||||| || | || | || |||||||| | || || || || || Sbjct 663891 CGCGAATGCGGTGGACATTCAAACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGG 663950 Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACG 156282 ||| | ||||| | | ||||| ||||| || | || | || |||| | Sbjct 663951 TCTTGAGAGTATCGTAGATACCCTCAATGCTGTCCGCGCTCACGTCAACCAGGAAGCAAG 664010 Query 156283 AACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAAT 156342 | | |||||| | || || | || ||||| || || || | || ||| | || Sbjct 664011 ACGCAAGCTGAGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGA 664070 Query 156343 ACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATAC 156402 |||| | ||||| | | ||||||||| | ||| |||| || |||||||| | Sbjct 664071 ACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTTTCAATATCCTCGCCGTGAATTC 664130 Query 156403 AGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCA 156462 || || || | |||| || |||||||||||||| ||| || | ||| || | Sbjct 664131 CGACAGCAACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACGTTGCCGTTAATCCGAA 664190 Query 156463 GAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAA 156496 ||||||||| || || ||||| || || ||||| Sbjct 664191 GAAGGTATGAACGCTCGAGAGTCTTGAATCCGAA 664224 >seq84 Length=584794 Score = 104 bits (114), Expect = 7e-17 Identities = 175/253 (69%), Gaps = 8/253 (3%) Strand=Plus/Plus Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654 |||||| || ||||| ||| | || || ||||| |||||||| ||||| ||||||| Sbjct 122000 ACGCTGGATGTAACCGGTTTCGGCGGTCTTGACAGCAGTATCAATCAGACCTTCACGACC 122059 Query 302655 ACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCC----CCCCAATAAAGGAGCTCT 302710 | |||| || |||||||| | ||| ||| | || | | | || | ||| ||| Sbjct 122060 AGCCATGGCGTGGAAGAAGAACTC----GGTAGGAGTCAAGCCGCGAAGGTATGAGTTCT 122115 Query 302711 CAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGT 302770 | ||||| ||||| | ||||| || | || |||||| || || || || || | || Sbjct 122116 CGACGAATCCACGGGATTCGGGAGAGTAATCATCCTTGGTGAAATGAGGGAGTGTACGGT 122175 Query 302771 TCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCA 302830 || ||||| | || |||||||| || || || ||| ||||| | | | ||| Sbjct 122176 ACTTGAAGCCGAACGGAATACGCTTGCCCTCCACAGACTGTTGTCCGACAAGGGCAGTCA 122235 Query 302831 TCTGCGAAATATT 302843 ||||||||||||| Sbjct 122236 TCTGCGAAATATT 122248 Score = 98.7 bits (108), Expect = 3e-15 Identities = 106/140 (76%), Gaps = 3/140 (2%) Strand=Plus/Plus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | || ||| |||||||| | || ||||| |||||| | ||||||||| Sbjct 121203 AGAATTTCCTTAAGACGTGGAACACCGAGAGTGACGTT---CTTGGATGACACACCAGCA 121259 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 ||||||||||| || || || | |||||| | || ||||| ||| || ||||||| Sbjct 121260 AAGTGGAAAGTGTTGAGTGTCATTTGAGTCGCAGGTTCACCGATAGACTGAGCCGCAAGA 121319 Query 301933 ATACCAACCATTTCTCCTGG 301952 | ||| |||||||| || || Sbjct 121320 ACACCGACCATTTCACCAGG 121339 >seq4 Length=582425 Score = 91.5 bits (100), Expect = 4e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 |||||||| | |||||||||||||| ||||| || |||||||| |||||||| || || Sbjct 321227 GCACCGTGGGCGATCATACAATCACGTTCCATCTCTCCGAAACGGAGACCACCGTCACGG 321286 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 || | |||||| ||||||| || || ||| | ||||||| || || || Sbjct 321287 GCACGACCCTCCACAGGCTGGCGGGTCAGAATCTGAGTAGGACCACGGGCACGAGCGTGA 321346 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657 ||| |||| ||||| || |||||||||||| | | ||||| | ||| Sbjct 321347 ATCTTGTCATCGACCATGTGGCGCAGACGCTGGTAGTAGGTAGGACCCAGGAA 321399 >seq51 Length=2183579 Score = 89.7 bits (98), Expect = 2e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 233271 TAGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCAT 233330 ||| ||||| ||||||| ||||||||||||||| ||||| | ||||||||| || | | Sbjct 551898 TAGTACCGTACGCAATCAAACAATCACGTTCCATCTCACCGAGACGCAGACCTCCGTTAC 551839 Query 233331 TTGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAAT 233390 ||| | ||||| | | || || || | | || | ||||||| ||||| | | Sbjct 551838 GTGAACGACCCTCGGTAGGCTGGCGGGTGAGAGTAGCAGTGGGACCCTTGGCACGCGAGT 551779 Query 233391 TAATTTTATCTTTAACCATATGCTTCAGTCTC 233422 || ||||||| |||||| ||||||||| || Sbjct 551778 GCATCTTATCTTGAACCATGTGCTTCAGTTTC 551747 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471815865095004