Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02- 16] 92 sequences; 29,140,916 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq73 138 1e-26 seq2 122 1e-21 seq82 109 7e-18 >seq73 Length=6463649 Score = 138 bits (152), Expect = 1e-26 Identities = 178/244 (73%), Gaps = 4/244 (2%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 573846 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 573905 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | | Sbjct 573906 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 573965 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC--GA 868868 ||||||||||| ||||| ||||| ||||||| |||||| || || ||||||||| || Sbjct 573966 AGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCATGCCAAGA 574025 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 || ||| || || | || ||| ||||| | |||||| ||||||||||||| | Sbjct 574026 AGACCGC--AGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCGACAA 574083 Query 868929 TGAT 868932 |||| Sbjct 574084 TGAT 574087 >seq2 Length=1012446 Score = 122 bits (134), Expect = 1e-21 Identities = 286/435 (66%), Gaps = 8/435 (2%) Strand=Plus/Plus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220 ||| ||||||||||||||| ||||||| | || | ||||||||||||| |||||| Sbjct 663357 ACTCGACGATCTCGGTGCAAAGGTTGGAGCTGCGAA-TAGTACCCAGGTTCTTCTGGTTA 663415 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | || |||| || ||||| | ||||||| |||| || ||||| |||| ||| Sbjct 663416 CTCTTCTTGTTGCAAGCATCCTTATAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCC 663475 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGCCCTNN 1628337 ||| ||||| |||||| || | || | || ||| ||| | ||||||| Sbjct 663476 TCGAGAATGGCATACCAGAGCTTCTGAGC---CTTGATGGTCTTGCGGCCACGGCCCTCC 663532 Query 1628338 NNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGC 1628397 || || | | ||||| || ||||||||| Sbjct 663533 TGCTCGTACTTCACGTAAAGAGCGTCGAACTCATCACCGTAAACATCAGCCAGGCCGGGG 663592 Query 1628398 GCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGG 1628457 |||||| || || ||||| | |||||| || || | | | || ||| ||||| Sbjct 663593 GCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGA 663652 Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517 || ||||||| ||||| |||||||| || || || ||||||||| ||||||||| Sbjct 663653 TCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCGCGAACCTCCTCCTTACCGTGGTTC 663712 Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577 || || ||||| | |||| | ||||||||||| |||||||||||| |||||| Sbjct 663713 TTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCATGGCTCCAGGTAGATAGCAAAG 663772 Query 1628578 GCGCCCTTGCGCTTG 1628592 || || ||||||| Sbjct 663773 GCACCAGGGCGCTTG 663787 Score = 111 bits (122), Expect = 2e-18 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||| | || |||||| | || || || | || |||||| | || |||||| Sbjct 479029 GCTGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACAGTCGCCAAC 479088 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||||| || ||||||||||| |||||||| |||||| || Sbjct 479089 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGTAAGACCTTCAACATCCAG 479139 >seq82 Length=774674 Score = 109 bits (120), Expect = 7e-18 Identities = 221/323 (68%), Gaps = 10/323 (3%) Strand=Plus/Minus Query 18096 CTTTGGCGAGTCGCACGGGGCGGGC-GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCA 18154 || ||||||||| ||| | || | |||||||||||| | || || || ||| ||| Sbjct 465770 CTATGGCGAGTCCCACTGC-CGCTCTGTCGGCTGCATCGTTGATGGATGTCCTCCGGGCA 465712 Query 18155 TGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCG 18214 ||| ||| | |||||||| |||||||| || || || ||||| || || ||| ||| Sbjct 465711 TGCAACTCACTGAGGCCGATATCCAGCCCCAAATGACCCGTCGCCGTCCCGGTCAGAGCG 465652 Query 18215 CACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACG 18274 | || | || ||||| ||||| || || ||| |||||||| ||||| ||| || Sbjct 465651 CCCTCACTACCCCGCGGGACGAGAAGGACCGAGTCGAGATCCAGTCAGGCACCGAGTTCG 465592 Query 18275 GCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCG 18334 || |||| || ||| | || | ||| | | || ||| |||||||| ||| | Sbjct 465591 GCGTCACTCTGGGCACACCAATTGGCATGATCGTCCGCAATGAGGACCAGCGTCCCAAGG 465532 Query 18335 ACTATTCCGACATGTGCAA------GGTGCCGCGGCCCT-CACACGCCGACTACACCTAC 18387 ||||| | ||| | ||| || || | ||||| || ||||||| ||||||| Sbjct 465531 ACTATGGCAACA-GCACAATGGACCTGTACCCCCGCCCTAGCCATGCCGACTTCACCTAC 465473 Query 18388 ATGGCCAAGTACGGCATCAAGGC 18410 | | ||||||||| | ||||| Sbjct 465472 CTTGAGAAGTACGGCGTTAAGGC 465450 Score = 100 bits (110), Expect = 3e-15 Identities = 117/157 (75%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 |||||||||||||| | || || || ||| ||||| || || | ||||| |||||| Sbjct 465083 GACAGCATCGGCGGAAGCGTAACATGTGTGATCCGCAATGTTCCAGTGGGCCTTGGCGAG 465024 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| |||||| | || ||| ||||| |||||| ||||| ||||| || || Sbjct 465023 CCCTGCTTCGACAAGCTTGAAGCCAAGCTCGGCCACGCAATGCTCAGCATCCCCGCAACA 464964 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| ||||| || ||| ||| || |||| |||| Sbjct 464963 AAGGGCTTCGAAATCGGCTCCGGTTTCGGCGGCTGCG 464927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107131650049164