Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02-
16] 92 sequences; 29,140,916 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq73 138 1e-26
seq2 122 1e-21
seq82 109 7e-18
>seq73
Length=6463649
Score = 138 bits (152), Expect = 1e-26
Identities = 178/244 (73%), Gaps = 4/244 (2%)
Strand=Plus/Plus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || |||||
Sbjct 573846 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 573905
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | |
Sbjct 573906 GACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 573965
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCC--GA 868868
||||||||||| ||||| ||||| ||||||| |||||| || || ||||||||| ||
Sbjct 573966 AGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCATGCCAAGA 574025
Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928
|| ||| || || | || ||| ||||| | |||||| ||||||||||||| |
Sbjct 574026 AGACCGC--AGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCGACAA 574083
Query 868929 TGAT 868932
||||
Sbjct 574084 TGAT 574087
>seq2
Length=1012446
Score = 122 bits (134), Expect = 1e-21
Identities = 286/435 (66%), Gaps = 8/435 (2%)
Strand=Plus/Plus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCTGGTTG 1628220
||| ||||||||||||||| ||||||| | || | ||||||||||||| ||||||
Sbjct 663357 ACTCGACGATCTCGGTGCAAAGGTTGGAGCTGCGAA-TAGTACCCAGGTTCTTCTGGTTA 663415
Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280
| || |||| || ||||| | ||||||| |||| || ||||| |||| |||
Sbjct 663416 CTCTTCTTGTTGCAAGCATCCTTATAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCC 663475
Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGCCCTNN 1628337
||| ||||| |||||| || | || | || ||| ||| | |||||||
Sbjct 663476 TCGAGAATGGCATACCAGAGCTTCTGAGC---CTTGATGGTCTTGCGGCCACGGCCCTCC 663532
Query 1628338 NNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGC 1628397
|| || | | ||||| || |||||||||
Sbjct 663533 TGCTCGTACTTCACGTAAAGAGCGTCGAACTCATCACCGTAAACATCAGCCAGGCCGGGG 663592
Query 1628398 GCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGG 1628457
|||||| || || ||||| | |||||| || || | | | || ||| |||||
Sbjct 663593 GCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGA 663652
Query 1628458 TCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTC 1628517
|| ||||||| ||||| |||||||| || || || ||||||||| |||||||||
Sbjct 663653 TCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCGCGAACCTCCTCCTTACCGTGGTTC 663712
Query 1628518 TTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAG 1628577
|| || ||||| | |||| | ||||||||||| |||||||||||| ||||||
Sbjct 663713 TTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCATGGCTCCAGGTAGATAGCAAAG 663772
Query 1628578 GCGCCCTTGCGCTTG 1628592
|| || |||||||
Sbjct 663773 GCACCAGGGCGCTTG 663787
Score = 111 bits (122), Expect = 2e-18
Identities = 91/111 (82%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| ||||||||| | || |||||| | || || || | || |||||| | || ||||||
Sbjct 479029 GCTGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACAGTCGCCAAC 479088
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||||||||||||||| || ||||||||||| |||||||| |||||| ||
Sbjct 479089 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGTAAGACCTTCAACATCCAG 479139
>seq82
Length=774674
Score = 109 bits (120), Expect = 7e-18
Identities = 221/323 (68%), Gaps = 10/323 (3%)
Strand=Plus/Minus
Query 18096 CTTTGGCGAGTCGCACGGGGCGGGC-GTCGGCTGCATCATCGACGGCGTGCCGCCGTGCA 18154
|| ||||||||| ||| | || | |||||||||||| | || || || ||| |||
Sbjct 465770 CTATGGCGAGTCCCACTGC-CGCTCTGTCGGCTGCATCGTTGATGGATGTCCTCCGGGCA 465712
Query 18155 TGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCG 18214
||| ||| | |||||||| |||||||| || || || ||||| || || ||| |||
Sbjct 465711 TGCAACTCACTGAGGCCGATATCCAGCCCCAAATGACCCGTCGCCGTCCCGGTCAGAGCG 465652
Query 18215 CACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACG 18274
| || | || ||||| ||||| || || ||| |||||||| ||||| ||| ||
Sbjct 465651 CCCTCACTACCCCGCGGGACGAGAAGGACCGAGTCGAGATCCAGTCAGGCACCGAGTTCG 465592
Query 18275 GCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCG 18334
|| |||| || ||| | || | ||| | | || ||| |||||||| ||| |
Sbjct 465591 GCGTCACTCTGGGCACACCAATTGGCATGATCGTCCGCAATGAGGACCAGCGTCCCAAGG 465532
Query 18335 ACTATTCCGACATGTGCAA------GGTGCCGCGGCCCT-CACACGCCGACTACACCTAC 18387
||||| | ||| | ||| || || | ||||| || ||||||| |||||||
Sbjct 465531 ACTATGGCAACA-GCACAATGGACCTGTACCCCCGCCCTAGCCATGCCGACTTCACCTAC 465473
Query 18388 ATGGCCAAGTACGGCATCAAGGC 18410
| | ||||||||| | |||||
Sbjct 465472 CTTGAGAAGTACGGCGTTAAGGC 465450
Score = 100 bits (110), Expect = 3e-15
Identities = 117/157 (75%), Gaps = 1/157 (1%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
|||||||||||||| | || || || ||| ||||| || || | ||||| ||||||
Sbjct 465083 GACAGCATCGGCGGAAGCGTAACATGTGTGATCCGCAATGTTCCAGTGGGCCTTGGCGAG 465024
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| |||||| | || ||| ||||| |||||| ||||| ||||| || ||
Sbjct 465023 CCCTGCTTCGACAAGCTTGAAGCCAAGCTCGGCCACGCAATGCTCAGCATCCCCGCAACA 464964
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202
||||| ||||| || ||| ||| || |||| ||||
Sbjct 464963 AAGGGCTTCGAAATCGGCTCCGGTTTCGGCGGCTGCG 464927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107131650049164
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |