Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02-
16] 92 sequences; 29,140,916 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq73 172 1e-37
seq72 122 2e-22
seq2 107 4e-18
>seq73
Length=6463649
Score = 172 bits (190), Expect = 1e-37
Identities = 160/203 (79%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
|| || ||| ||| || |||||||| || |||| ||| || | |||||| |||||||||
Sbjct 2153229 TGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCATCCTCCAGCTGC 2153288
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || ||||||||||| || || |||||||| |||| ||| ||||| || || |||||
Sbjct 2153289 TTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCCCTCCTTATCTTGAATCTTG 2153348
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||||||||| ||||| ||||| || || |||||||| || ||||| |||||||| ||
Sbjct 2153349 CTTTTCACGTTGTCGATAGTGTCTGAACTCTCAACCTCCAGTGTGATAGTCTTTCCAGTC 2153408
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
| ||||| ||||| | |||||
Sbjct 2153409 AAGGTCTTGACAAAGATTTGCAT 2153431
Score = 170 bits (188), Expect = 4e-37
Identities = 165/212 (78%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||| ||||| || || |||||||||||||| | ||||| | ||||||
Sbjct 2153448 AGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCT 2153507
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || ||||||||||||||||| ||||| || ||||| || |||| ||| |||||||||
Sbjct 2153508 TCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCC 2153567
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| || || || || ||||| || || | |||||||| || ||||| |||
Sbjct 2153568 TGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 2153627
Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|| || || || ||||| || || | ||||||
Sbjct 2153628 TTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 2153659
Score = 167 bits (184), Expect = 5e-36
Identities = 157/200 (79%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||| ||||| || || |||||||||||||| | ||||| | ||||||
Sbjct 2153676 AGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCT 2153735
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || ||||||||||||||||| ||||| || ||||| || |||| ||| |||||||||
Sbjct 2153736 TCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC 2153795
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| || || || || ||||| || || | |||||||| || ||||| |||
Sbjct 2153796 TGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 2153855
Query 211083 TTTCCCGTGAGAGTCTTTAC 211102
|| || || || ||||||||
Sbjct 2153856 TTGCCGGTCAGGGTCTTTAC 2153875
Score = 154 bits (170), Expect = 3e-32
Identities = 148/190 (78%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||| ||||| || || ||||||||||| |||| | ||| | ||||||
Sbjct 2153958 AGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAGTCCGACAAGGTGCGACCATCT 2154017
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || ||||||||||||||||| ||||| || ||||| || |||| ||| |||||||||
Sbjct 2154018 TCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCC 2154077
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
||||| || || || || ||||| || || | |||||||| || ||||| |||
Sbjct 2154078 TGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 2154137
Query 211083 TTTCCCGTGA 211092
|| || ||||
Sbjct 2154138 TTGCCAGTGA 2154147
>seq72
Length=3214209
Score = 122 bits (134), Expect = 2e-22
Identities = 137/182 (75%), Gaps = 6/182 (3%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || ||||| | ||||| || ||||||||||| ||||||||
Sbjct 2114461 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2114402
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| || |||||||| |||| || ||||| ||||||||||| || || || |||
Sbjct 2114401 AGGCGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTGGTCTTGACATTGTCG 2114342
Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103
|||||||| ||| || || ||||| || || ||||| ||||| || ||||| ||
Sbjct 2114341 ATGGTGTC---GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 2114285
Query 211104 AA 211105
||
Sbjct 2114284 AA 2114283
>seq2
Length=1012446
Score = 107 bits (118), Expect = 4e-18
Identities = 190/276 (69%), Gaps = 6/276 (2%)
Strand=Plus/Plus
Query 178093 GTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149
|||||| ||||| ||||| || ||| ||||| || || |||||||| | ||
Sbjct 663403 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTATAGAGCATGAAGGGGTTACC 663459
Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209
||||| || ||| |||||||| || ||| |||| ||| || || |||||
Sbjct 663460 AGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGAGCTTCTGAGCCTTGATGGTCTTGCG 663519
Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269
| | || || | ||||||||| ||| || | ||||| || || || |||||
Sbjct 663520 GCCACGGCCCTCCTGCTCGTACTTCACGTAAAGAGCGTCGAACTCATCACCGTAAACATC 663579
Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329
| | || ||||| ||||| |||||||||||||| |||| | ||||| ||| || ||
Sbjct 663580 AGCCAGGCCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACG 663639
Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
||||||||||| || | ||||| | || |||||
Sbjct 663640 CTTCATGAAGAGATCGGGAGTCCACAAAGCGTAGAA 663675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159150633649580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |