Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02-
16] 92 sequences; 29,140,916 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq73 116 9e-21
seq72 98.7 2e-15
seq13 98.7 2e-15
>seq73
Length=6463649
Score = 116 bits (128), Expect = 9e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||| || | || || ||| || || |||| ||||| || | | |||
Sbjct 2153210 ACGCAGACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGT 2153269
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| |||||||||||||| || || ||||| || ||||| ||
Sbjct 2153270 ACGTCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCC 2153329
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| ||||| ||||| ||||| ||||| |||||||| | || || || |
Sbjct 2153330 CTCCTTATCTTGAATCTTGCTTTTCACGTTGTCGATAGTGTCTGAACTCTCAACCTCCAG 2153389
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||| || ||||| || || | || | ||||||
Sbjct 2153390 TGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 2153431
Score = 100 bits (110), Expect = 7e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || || || || || |||| |||||||| | | ||| | |||||
Sbjct 4900261 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCC 4900202
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || || || ||||| || |||||||| |||||||||
Sbjct 4900201 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCT 4900142
>seq72
Length=3214209
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| ||| || || | ||||| || |||||||| || ||||||||
Sbjct 2114461 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2114402
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || |||||||| ||||| || |||||||| ||| ||| |||
Sbjct 2114401 AGGCGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTGGTCTTGACATTGTCG 2114342
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|||||||| | || || || | || || ||||| ||||||| || || | |||
Sbjct 2114341 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2114283
>seq13
Length=28177
Score = 98.7 bits (108), Expect = 2e-15
Identities = 199/292 (68%), Gaps = 5/292 (2%)
Strand=Plus/Plus
Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500
|| ||||| ||||| |||| ||||||||| | || ||||| ||||| | |
Sbjct 23638 ACATTATACTTAATGTTTGCATTATTTTCTGGTTTAATTGGTACAGCGTTTTCAGTTTTA 23697
Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAG-TGGTAATAGCCAACTTTA 7559
|| || ||||| ||| | | ||| ||| ||| ||| | || ||| || | ||
Sbjct 23698 ATTAGATTAGAGTTATCAGGTCCAGGTGTACAA-TATATATCTGACAAT---CAGTTATA 23753
Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619
|| ||| ||||| |||||||| || | ||||||||||| | |||||||| | |
Sbjct 23754 TAATAGTATAATTACAGCGCATGCTATTTTAATGATTTTCTTCATGGTTATGCCTGCATT 23813
Query 7620 GATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTT 7679
|| || ||||| || |||| || | || ||| | | || | ||| |||||||| ||
Sbjct 23814 AATTGGAGGTTTTGGTAATTTCTTATTACCATTATTAGTAGGAGGTCCAGATATGGCATT 23873
Query 7680 TCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731
|| || | || |||||||||||||||||| || ||| |||||| ||
Sbjct 23874 CCCTAGATTAAATAATATAAGTTTTTGATTATTAGTTCCTAGTTTATTTTTA 23925
Score = 91.5 bits (100), Expect = 4e-13
Identities = 82/101 (81%), Gaps = 4/101 (4%)
Strand=Plus/Minus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCT 370729
||||||||| ||||| ||||||||||||||||| ||||| |||||||| || || ||
Sbjct 24318 TTCAGGATGTCCAAAGAATCAGAATAAATGTTGGAATAAA--ATAGGATCACCACCACCA 24261
Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770
| | ||||| || ||||||||| ||||||||||||||
Sbjct 24260 GCTACTTCAAAGAATGAAGTATTAAAGTTTCTATCAGTTAA 24220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192529794303848
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |