Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001561935.1_202016-02- 16] 92 sequences; 29,140,916 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq73 116 9e-21 seq72 98.7 2e-15 seq13 98.7 2e-15 >seq73 Length=6463649 Score = 116 bits (128), Expect = 9e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || | || || ||| || || |||| ||||| || | | ||| Sbjct 2153210 ACGCAGACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGT 2153269 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||| || |||||||| |||||||||||||| || || ||||| || ||||| || Sbjct 2153270 ACGTCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCC 2153329 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||| ||||| ||||| ||||| ||||| |||||||| | || || || | Sbjct 2153330 CTCCTTATCTTGAATCTTGCTTTTCACGTTGTCGATAGTGTCTGAACTCTCAACCTCCAG 2153389 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || ||||| || || | || | |||||| Sbjct 2153390 TGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 2153431 Score = 100 bits (110), Expect = 7e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || || || |||| |||||||| | | ||| | ||||| Sbjct 4900261 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCC 4900202 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || || || ||||| || |||||||| ||||||||| Sbjct 4900201 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTCT 4900142 >seq72 Length=3214209 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 2114461 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 2114402 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || |||||||| ||||| || |||||||| ||| ||| ||| Sbjct 2114401 AGGCGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTGGTCTTGACATTGTCG 2114342 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || || || | || || ||||| ||||||| || || | ||| Sbjct 2114341 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 2114283 >seq13 Length=28177 Score = 98.7 bits (108), Expect = 2e-15 Identities = 199/292 (68%), Gaps = 5/292 (2%) Strand=Plus/Plus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||| ||||| |||| ||||||||| | || ||||| ||||| | | Sbjct 23638 ACATTATACTTAATGTTTGCATTATTTTCTGGTTTAATTGGTACAGCGTTTTCAGTTTTA 23697 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAG-TGGTAATAGCCAACTTTA 7559 || || ||||| ||| | | ||| ||| ||| ||| | || ||| || | || Sbjct 23698 ATTAGATTAGAGTTATCAGGTCCAGGTGTACAA-TATATATCTGACAAT---CAGTTATA 23753 Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619 || ||| ||||| |||||||| || | ||||||||||| | |||||||| | | Sbjct 23754 TAATAGTATAATTACAGCGCATGCTATTTTAATGATTTTCTTCATGGTTATGCCTGCATT 23813 Query 7620 GATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTT 7679 || || ||||| || |||| || | || ||| | | || | ||| |||||||| || Sbjct 23814 AATTGGAGGTTTTGGTAATTTCTTATTACCATTATTAGTAGGAGGTCCAGATATGGCATT 23873 Query 7680 TCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 || || | || |||||||||||||||||| || ||| |||||| || Sbjct 23874 CCCTAGATTAAATAATATAAGTTTTTGATTATTAGTTCCTAGTTTATTTTTA 23925 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/101 (81%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCT 370729 ||||||||| ||||| ||||||||||||||||| ||||| |||||||| || || || Sbjct 24318 TTCAGGATGTCCAAAGAATCAGAATAAATGTTGGAATAAA--ATAGGATCACCACCACCA 24261 Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 | | ||||| || ||||||||| |||||||||||||| Sbjct 24260 GCTACTTCAAAGAATGAAGTATTAAAGTTTCTATCAGTTAA 24220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529794303848