Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq833 116 4e-21 seq1127 104 3e-17 >seq833 Length=32517 Score = 116 bits (128), Expect = 4e-21 Identities = 719/1144 (63%), Gaps = 20/1144 (2%) Strand=Plus/Minus Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 53770 || ||||| || || || || ||||||| || | | || | | ||||| |||||| Sbjct 25727 GAAGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACTGTACTCGACGATCTCGGTGCAA 25668 Query 53771 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 53830 || || | || || || | || | || |||||||| ||||| || |||||| Sbjct 25667 AGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCC 25608 Query 53831 TTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACG 53890 ||||| || ||||| || ||||||| ||| |||||| || | ||| || | ||||| Sbjct 25607 TTATAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGAGC 25548 Query 53891 ACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATACAA 53946 ||||||| || | || | | ||| | ||||| | ||| | | Sbjct 25547 TTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTCACGTAAAGAG 25490 Query 53947 TCGTTCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAA 54006 ||| | ||||| || || |||||| ||| || || || | || || | | Sbjct 25489 -CGT-CGAACTCATCACCGTAAACATCAGCCAGGCCGGGGGCCTCGTTGGGGCAGAAGAG 25432 Query 54007 CGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 54066 | ||| || |||| ||| || || ||||| |||||||| ||| |||| | ||| Sbjct 25431 GGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGAGTCCACAAAGCGTA 25372 Query 54067 AAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 54126 || || || | || | | ||||| || || ||||| |||||||||||| | Sbjct 25371 GAAGAGGTCACGGGCGCGAACCTCCTCCTTACCGTGGTTCTTGCGCAGATCGAGGAACTC 25312 Query 54127 CATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCC 54186 | | ||| | ||||| || |||| ||| || | | | ||||| || ||||| || Sbjct 25311 GAAGACATCGGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTTACC 25252 Query 54187 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 54246 || || || | || | ||||||||||| | || | || ||| |||| |||||| || Sbjct 25251 ACCTTGGTCCACATAGCGTGCGGTGTTATTGAACACGCGCAGCATAGGAACAATACCGTT 25192 Query 54247 GGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGAT 54304 ||| | || ||||| || || || || | || ||||| | ||| Sbjct 25191 GGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT--C 25134 Query 54305 AGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 54364 | ||| || || || || | || ||||| | || || || | ||||| ||||| Sbjct 25133 AAACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGATA 25074 Query 54365 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACGA 54421 ||||| || || || | ||| || || || | ||| |||| | || | | Sbjct 25073 CCCTCAATGCTGTCCGCGCTCACGTCAACCAGGA---AGCAAGACGCAAGCTGAGGTTGG 25017 Query 54422 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 54481 ||| | ||||| || | || || || ||||| || || | || | || | | Sbjct 25016 GGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGAACTTCTGGGACATCAAG 24957 Query 54482 TTGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 54541 | ||| ||||| || || || |||||| |||||||| || || |||||||| Sbjct 24956 TGGTATGTCTCAATGGCCTTTTCAATATCCTCGCCGTGAATTCCGACAGCAACACGCATC 24897 Query 54542 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCC 54601 | || ||||||||| | ||| | | ||| ||| || || | ||| || || Sbjct 24896 AGCAAGTGCTGAGGACGCTCAGCAACGTTGCCGTTAATCCGAAGAAGGTATGAACGCTCG 24837 Query 54602 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTG 54661 | ||| || || || || ||||||| ||||| || ||||| | ||| | |||||| Sbjct 24836 AGAGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTTG 24777 Query 54662 AGTTTATCCTTATATTTGTTAACTACATCCATGGTAATAC-TTGAAATAATCGGAGAATG 54720 || | || || || |||| | | | | || | | |||| || || |||| | | Sbjct 24776 AGCTCTTCGGCATGCTTCATAACGATCT-CGTAGTGTTCCTTTGAGATCATAGGAGCAGG 24718 Query 54721 TTTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGttt 54780 || || || || || ||||||| | | || || || ||| | || Sbjct 24717 CTTATTGTTCTTGGGGTTCACATAGTGGTAGAGGTCGGAAATGACCATGGAGAATTGCTT 24658 Query 54781 ttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGG 54840 ||| |||| ||||| ||||| || ||||| || | || || ||||||||||| || || Sbjct 24657 TTTGGTTTGCTTGTGGAGATTCGAAACGGCGATACGTGCAGCCAGAATGGCATAGTCGGG 24598 Query 54841 ATGT 54844 ||| Sbjct 24597 GTGT 24594 >seq1127 Length=175000 Score = 104 bits (114), Expect = 3e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194 || ||||| || ||| ||||||||||| | | || | |||||||| || ||||| Sbjct 150734 CAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGA 150793 Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254 |||||||| | ||||||||| || ||||| || ||||| || ||||| || || ||||| Sbjct 150794 CCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAG 150853 Query 24255 ATTCCTTCTACTGCCGCAAAGGCAA 24279 || || || || || || ||||||| Sbjct 150854 ATACCCTCAACAGCGGCGAAGGCAA 150878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593709309962880