Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09-
20] 1,656 sequences; 28,072,829 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq1641 109 5e-19
seq433 98.7 8e-16
>seq1641
Length=3225
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 20973 TGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGT 21032
|||| ||||||||||| || |||||||| |||| ||||| || | |||||||||||
Sbjct 3221 TGCAGTGTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGCTGC 3162
Query 21033 TTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTT 21092
|| || || | ||||| | ||||||||| ||| | || |||||||| ||| ||
Sbjct 3161 TTACCAGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTG 3102
Query 21093 TGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTT 21152
|| || | | ||| |||||| | || ||| || | ||| ||||||||||| ||
Sbjct 3101 GACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTA 3042
Query 21153 AACGTTTTGACAAATATTTGCAT 21175
| || ||||| || || |||||
Sbjct 3041 AGGGTCTTGACGAAGATCTGCAT 3019
>seq433
Length=43892
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | ||||||| ||||| ||| |||||| || ||||| |||||||
Sbjct 2123 CCACCACGCAGACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 2064
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | | ||||||||||| || || || | ||||| | ||||||||| |||
Sbjct 2063 AGAGTACGTCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 2004
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || ||||| || ||||| |||||| | | ||| ||| || |||
Sbjct 2003 ATTCCCTCCTTATCTTGAATCTTGCTTTTCACGTTGTCGATAGTGTCTGAACTCTCAACC 1944
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || || ||||| || || || || |||||||| ||||||||
Sbjct 1943 TCCAGTGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1897
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||| ||||| || |||||||| || | ||||| || | || || || || |||||
Sbjct 1865 GTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCT 1806
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| | || || | ||||||||| ||| | || |||||||| ||| || ||
Sbjct 1805 GCGAAGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTT 1746
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| |||||| | || ||| || | ||| ||||||||||| || | ||
Sbjct 1745 ACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTC 1686
Query 21159 TTGACAAATATTTGCAT 21175
||||| || || |||||
Sbjct 1685 TTGACGAAGATCTGCAT 1669
Score = 82.4 bits (90), Expect = 6e-11
Identities = 122/173 (71%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
||||| ||||| || |||||||| || | ||||| || | || || || || |||||
Sbjct 1637 GTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCT 1578
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
|| | || || | |||||||||| ||| | || |||||||| ||| || ||
Sbjct 1577 GCGAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTT 1518
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151
|| | | ||| |||||| | || ||| || | ||| ||||||||||||||
Sbjct 1517 ACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCGGT 1465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422250677753696
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |