Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09-
20] 1,656 sequences; 28,072,829 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1127 210 2e-49
seq801 114 1e-20
seq1641 111 2e-19
seq433 111 2e-19
>seq1127
Length=175000
Score = 210 bits (232), Expect = 2e-49
Identities = 220/286 (77%), Gaps = 5/286 (2%)
Strand=Plus/Minus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| |||||||| || || |||||||||| ||||||| | || ||
Sbjct 151343 ATCTGGCAAATGTACAAGAAGGCCGAAGCTTCTTTCTGGACCGCCGAGGAGATTGATCTC 151284
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| ||||||| | ||| ||||||| | ||||| | ||||||
Sbjct 151283 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGATGATGAGCGTTACTTCATCTCC 151224
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||||| |||||||| ||||||||| |||||| || ||||||||||| || |||||||||
Sbjct 151223 CACGTTCTGGCCTTCTTCGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGTCGAGCGT 151164
Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871
||| | |||| |||| ||| | ||||||| || |||||||||||||| |||||| ||
Sbjct 151163 TTCAGTTCAG-AGGTTCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGATCATGAT 151105
Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
||||||| | ||||| || | || || ||||||||||| |||
Sbjct 151104 GGAGAACATCCACTCCGAGACCTACTCTTTGCTCATCGACACCTAC 151059
Score = 194 bits (214), Expect = 2e-44
Identities = 317/454 (70%), Gaps = 2/454 (0%)
Strand=Plus/Minus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||| | ||||| || ||||||||| || | | ||| | |||||| ||| |
Sbjct 150941 AGAAGGCCAACTGGGCCCTCCGCTGGATCAACGACCGCGAGTCAACCTTCGCTTCGCGTC 150882
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
|||| |||||||| || || ||||| ||||||| || ||| |||||| |||| || |
Sbjct 150881 TGGTTGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCATTCGCCTCCATCTTCT 150822
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||| ||||| || ||| | |||||||| || |||||| ||||||||||||||| | |
Sbjct 150821 GGCTGAAGAAGCGTGGCTTGATGCCCGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTG 150762
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221
|||||||||| || ||||| || || |||| ||| || || || || ||
Sbjct 150761 ACGAGGGTCTCCACACTGACTTCGCTTGCCTGCTCTTCTCCCACATGAACCACCGCCCCG 150702
Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281
| | | ||| ||| ||| | ||| || |||| |||||||||| ||||| |
Sbjct 150701 ACCCCAAGATCGTTCAGGACATCATTGTCGAGGCCGTCGGCATCGAGCAGGAGTTCCTGA 150642
Query 117282 CCGAAGCGCTGCCGGTGC-GTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATC 117340
| || || || || ||| |||| || || | || | | | ||||| | |||||
Sbjct 150641 CTGACGCTCTTCC-CTGCGGTCTTCTTGGCATGAACTCCAAGCTGATGTGCGAGTACATT 150583
Query 117341 GAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCC 117400
||||||||||| ||| | |||||| | | || | | | ||| |||||||| | ||
Sbjct 150582 GAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACTACAACGCTACC 150523
Query 117401 AACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434
||||| | ||||| ||| | ||||||| |||
Sbjct 150522 AACCCCTTCGACTTCATGGAGTCCATCTCCCTGG 150489
>seq801
Length=61771
Score = 114 bits (126), Expect = 1e-20
Identities = 134/181 (74%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || ||||| || ||||| ||| |||| ||||| | | ||||| | |
Sbjct 22324 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 22383
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | || || ||||| || ||| | |||||||| || ||
Sbjct 22384 GACAATGTCAAGACCAAGATCCAGGATAAGGAGGGTATTCCCCCTGACCAGCAGCGCCTG 22443
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| ||||| ||||| || || | |||||||| | |||||||||||||||||||
Sbjct 22444 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAAG 22503
Query 40879 G 40879
|
Sbjct 22504 G 22504
>seq1641
Length=3225
Score = 111 bits (122), Expect = 2e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || ||||| ||||||||| | || || || ||| |
Sbjct 3019 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGC 3078
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | ||| ||||| | ||||| ||||| || ||| | ||||||
Sbjct 3079 GATACTATCGACAATGTAAAGTCCAAAATCCAGGACAAGGAGGGAATTCCCCCCGACCAG 3138
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || |||| ||| || || |||||||| || | || ||||| || || |||
Sbjct 3139 CAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACCCTTTCGGATTATAAC 3198
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCT 40895
|||||||||||| |||| ||||| ||
Sbjct 3199 ATCCAGAAGGAGTCCACACTGCACCT 3224
>seq433
Length=43892
Score = 111 bits (122), Expect = 2e-19
Identities = 144/199 (72%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 40700 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGC 40759
||||||| || || || ||||| ||||||||| | || || || ||| ||| | |
Sbjct 1451 TCGTAAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCG 1510
Query 40760 AAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCA 40819
| | | ||| ||||| | ||||| ||||| || ||| |||||||||| || ||||
Sbjct 1511 ACAATGTAAAGTCCAAAATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTCA 1570
Query 40820 TCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGG 40879
||| ||| ||||| || || || || | ||||||||| || || |||||||||||||
Sbjct 1571 TCTTCGCAGGCAAGCAACTTGAAGATGGCCGCACCCTCTCAGATTATAACATCCAGAAGG 1630
Query 40880 AGGCCACGCTGCATCTAGT 40898
| |||| || || || ||
Sbjct 1631 AATCCACACTTCACCTCGT 1649
Score = 111 bits (122), Expect = 2e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || || ||||| ||||||||| | || || || ||| |
Sbjct 1669 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGC 1728
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | ||| ||||| | ||||| ||||| || ||| | ||||||
Sbjct 1729 GATACTATCGACAATGTAAAGTCCAAAATCCAGGACAAGGAGGGAATTCCCCCCGACCAG 1788
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || ||||||| ||| ||||| || || || || | ||||||||| || || |||
Sbjct 1789 CAGCGCCTCATCTTCGCAGGCAAGCAACTTGAAGATGGCCGCACCCTCTCAGATTATAAC 1848
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||| |||| || || || ||
Sbjct 1849 ATCCAGAAGGAATCCACACTTCACCTCGT 1877
Score = 95.1 bits (104), Expect = 1e-14
Identities = 133/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGG 40771
|||| ||||| ||||||||| | || || || ||| ||| | | | | | |||
Sbjct 1181 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAATGTAAAGT 1240
Query 40772 AAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCA 40831
||||| | ||||| ||||| || ||| | |||||||| || ||||||| ||| ||||
Sbjct 1241 CCAAAATCCAGGACAAGGAGGGAATTCCCCCCGACCAGCAGCGCCTCATCTTCGCAGGCA 1300
Query 40832 AACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGC 40891
| || || || || | |||||| | ||||| |||||||||||||| |||| || |
Sbjct 1301 AGCAACTTGAAGATGGTCGCACCTTGTCGGACTATAACATCCAGAAGGAATCCACACTTC 1360
Query 40892 ATCTAGT 40898
| || ||
Sbjct 1361 ACCTCGT 1367
Score = 93.3 bits (102), Expect = 4e-14
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833
|| |||| || || ||||| || ||| | |||||||| || || |||| ||| || ||
Sbjct 1981 AAGATTCAAGATAAGGAGGGAATTCCCCCTGACCAGCAGCGTCTTATCTTCGCTGGTAAG 2040
Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893
|||||||| || | || || || ||||||||||||||||||||| ||| ||||||
Sbjct 2041 CAGCTGGAGGATGGACGTACTCTTTCGGACTACAACATCCAGAAGGAGAGCACCCTGCAT 2100
Query 40894 CTAGTGTTGCG 40904
| ||| ||||
Sbjct 2101 TTGGTGCTGCG 2111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515208534962560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |