Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq433 111 1e-19 seq1641 109 4e-19 >seq433 Length=43892 Score = 111 bits (122), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||| || || || || ||| | || || | |||||||||||||| Sbjct 1860 TTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAA 1801 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGA 34315 ||||| |||||||||||| ||| | | ||||||||| || ||||| ||||| | Sbjct 1800 GATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTC--CTGGATTTTGGACTTTACA 1743 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | | || | |||| | || || || || | |||||||| ||||| || || || || Sbjct 1742 TTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTG 1683 Query 34376 ACAAAGATCTGCAT 34389 || ||||||||||| Sbjct 1682 ACGAAGATCTGCAT 1669 Score = 96.9 bits (106), Expect = 2e-15 Identities = 128/173 (74%), Gaps = 6/173 (3%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGA 34256 ||| ||||| ||||| ||||| |||| | || || | || || | ||||||||||||| Sbjct 1350 TTCCTTCTGGATGTTATAGTCCGACAAGGTG-CGACCATCTTCAAGTTGCTTGCCTGCGA 1292 Query 34257 AAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAG 34314 | ||||| |||||||||||| ||| | | ||||||||| || ||||| ||||| Sbjct 1291 AGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTC--CTGGATTTTGGACTTTAC 1234 Query 34315 ATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGA 34367 || | | || | |||| | || || || || | |||||||| ||||| |||| Sbjct 1233 ATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTGA 1181 Score = 93.3 bits (102), Expect = 3e-14 Identities = 131/182 (72%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| ||||| || || || || ||| | || || | |||||||||||||| Sbjct 1632 TTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAA 1573 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGA 34315 ||||| ||||||||||| ||| | | ||||||||| || ||||| ||||| | Sbjct 1572 GATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC--CTGGATTTTGGACTTTACA 1515 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | | || | |||| | || || || || | |||||||| |||||||| || || || Sbjct 1514 TTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTT 1455 Query 34376 AC 34377 || Sbjct 1454 AC 1453 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | |||||||| || | || || || ||||| ||||||||||| || Sbjct 2123 CCACCACGCAGACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 2064 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||| |||||| || ||||| || || ||||||||||| ||| Sbjct 2063 AGAGTACGTCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 2004 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT--AGATCGGCTATCGAATCGGTCGATTCGA 34340 | | |||||| || ||| ||||||| | | | | || | || | || | Sbjct 2003 ATTCCCTCCTTATCTTGAATC--TTGCTTTTCACGTTGTCGATAGTGTCTGAACTCTCAA 1946 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | |||| ||||| || || || || | || || |||||||| ||||| Sbjct 1945 CCTCCAGTGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1897 >seq1641 Length=3225 Score = 109 bits (120), Expect = 4e-19 Identities = 141/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||| || || || || |||| | || |||| |||||| || ||||| Sbjct 3209 TCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGCTGCTTACCAGCGAAG 3150 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316 || || |||||||||||| ||| | | ||||||||| || ||||| ||||| || Sbjct 3149 ATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTC--CTGGATTTTGGACTTTACAT 3092 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | | || | |||| | || || || || | |||||||| ||||| || || || || | Sbjct 3091 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGA 3032 Query 34377 CAAAGATCTGCAT 34389 | ||||||||||| Sbjct 3031 CGAAGATCTGCAT 3019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323065479599360