Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09-
20] 1,656 sequences; 28,072,829 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq433 111 1e-19
seq1641 109 4e-19
>seq433
Length=43892
Score = 111 bits (122), Expect = 1e-19
Identities = 142/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| ||||| || || || || ||| | || || | ||||||||||||||
Sbjct 1860 TTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAA 1801
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGA 34315
||||| |||||||||||| ||| | | ||||||||| || ||||| ||||| |
Sbjct 1800 GATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTC--CTGGATTTTGGACTTTACA 1743
Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375
| | | || | |||| | || || || || | |||||||| ||||| || || || ||
Sbjct 1742 TTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTG 1683
Query 34376 ACAAAGATCTGCAT 34389
|| |||||||||||
Sbjct 1682 ACGAAGATCTGCAT 1669
Score = 96.9 bits (106), Expect = 2e-15
Identities = 128/173 (74%), Gaps = 6/173 (3%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGA 34256
||| ||||| ||||| ||||| |||| | || || | || || | |||||||||||||
Sbjct 1350 TTCCTTCTGGATGTTATAGTCCGACAAGGTG-CGACCATCTTCAAGTTGCTTGCCTGCGA 1292
Query 34257 AAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAG 34314
| ||||| |||||||||||| ||| | | ||||||||| || ||||| |||||
Sbjct 1291 AGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTC--CTGGATTTTGGACTTTAC 1234
Query 34315 ATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGA 34367
|| | | || | |||| | || || || || | |||||||| ||||| ||||
Sbjct 1233 ATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTGA 1181
Score = 93.3 bits (102), Expect = 3e-14
Identities = 131/182 (72%), Gaps = 4/182 (2%)
Strand=Plus/Minus
Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257
||| ||||| ||||| || || || || ||| | || || | ||||||||||||||
Sbjct 1632 TTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAA 1573
Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGA 34315
||||| ||||||||||| ||| | | ||||||||| || ||||| ||||| |
Sbjct 1572 GATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC--CTGGATTTTGGACTTTACA 1515
Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375
| | | || | |||| | || || || || | |||||||| |||||||| || || ||
Sbjct 1514 TTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTT 1455
Query 34376 AC 34377
||
Sbjct 1454 AC 1453
Score = 84.2 bits (92), Expect = 1e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | |||||||| || | || || || ||||| ||||||||||| ||
Sbjct 2123 CCACCACGCAGACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 2064
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || |||| |||||| || ||||| || || ||||||||||| |||
Sbjct 2063 AGAGTACGTCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 2004
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTT--AGATCGGCTATCGAATCGGTCGATTCGA 34340
| | |||||| || ||| ||||||| | | | | || | || | || |
Sbjct 2003 ATTCCCTCCTTATCTTGAATC--TTGCTTTTCACGTTGTCGATAGTGTCTGAACTCTCAA 1946
Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
| |||| ||||| || || || || | || || |||||||| |||||
Sbjct 1945 CCTCCAGTGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1897
>seq1641
Length=3225
Score = 109 bits (120), Expect = 4e-19
Identities = 141/193 (73%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||| || || || || |||| | || |||| |||||| || |||||
Sbjct 3209 TCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGCTGCTTACCAGCGAAG 3150
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316
|| || |||||||||||| ||| | | ||||||||| || ||||| ||||| ||
Sbjct 3149 ATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTC--CTGGATTTTGGACTTTACAT 3092
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| | || | |||| | || || || || | |||||||| ||||| || || || || |
Sbjct 3091 TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGA 3032
Query 34377 CAAAGATCTGCAT 34389
| |||||||||||
Sbjct 3031 CGAAGATCTGCAT 3019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323065479599360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |