Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq1127 118 9e-22 seq433 93.3 4e-14 seq1641 86.0 6e-12 >seq1127 Length=175000 Score = 118 bits (130), Expect = 9e-22 Identities = 283/418 (68%), Gaps = 10/418 (2%) Strand=Plus/Minus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || |||||||| || || ||||| ||||| || ||| || || | || || ||| || Sbjct 150876 GCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCATTCGCCTCCATCTTCTGGCTG 150817 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||| |||||||||| || || || ||||||| | || || || |||||| Sbjct 150816 AAGAAGCGTGGCTTGATGCCCGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGACGAG 150757 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT-TGTCAATAAACCGA-CGC 58158 |||||||| ||||| || || ||||| | | ||| ||||| || |||| | | Sbjct 150756 GGTCTCCACACTGACTTCGCTTGCCTGCTCTTCTCCCACATGAACCACCGCCCCGACCCC 150697 Query 58159 GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCG 58218 ||||| | |||||| || |||||| |||| ||||| | ||||| | || | Sbjct 150696 AAGATCG--TTCAGGACATCATTGTCGAGGCCGTCGGCATCGAGCAGGAGTTCCTGACTG 150639 Query 58219 AAGC-CCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAG 58277 | || | | || | || | | || || |||||| | |||||| ||||||||||| Sbjct 150638 ACGCTCTTCCCTGCGGTC-TTCTTGGCATGAACTCCAAGCTGATGTGCGAGTACATTGAG 150580 Query 58278 TTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAA 58335 || || || ||| | || || | | || | ||| || | |||||| | | | Sbjct 150579 TTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGA-AGT-ACTACAACGCTACCA 150522 Query 58336 ATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393 | || || || || ||| | ||||| || | |||||||| ||||| ||||| || Sbjct 150521 ACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAA 150464 >seq433 Length=43892 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || |||||| | || ||||| | | Sbjct 1669 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGC 1728 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| | || || | ||| ||||||||| || | || ||||||||| Sbjct 1729 GATACTATCGACAATGTAAAGTCCAAAATCCAGGACAAGGAGGGAATTCCCCCCGACCAG 1788 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| || | ||||| || | ||||||||| Sbjct 1789 CAGCGCCTCATCTTCGCAGGCAAGCAACTTGAAGATGGCCGCACCCTCTCAGATTATAAC 1848 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || || || ||||| || ||||| || || ||| | || | || |||| Sbjct 1849 ATCCAGAAGGAATCCACACTTCACCTCGTCCTTCGTCTACGTGGTGGTA 1897 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||||||||| ||||| ||||| || |||||| | || ||||| | ||| | | ||| Sbjct 1451 TCGTAAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCG 1510 Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322 | | || || | ||| ||||||||| || | || || ||||||||||| || | Sbjct 1511 ACAATGTAAAGTCCAAAATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTCA 1570 Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382 | ||||| ||||| || | ||||| || | ||||||||||| || || | Sbjct 1571 TCTTCGCAGGCAAGCAACTTGAAGATGGCCGCACCCTCTCAGATTATAACATCCAGAAGG 1630 Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||| || ||||| || || ||| | || | || |||| Sbjct 1631 AATCCACACTTCACCTCGTCCTTCGTCTACGTGGTGGTA 1669 >seq1641 Length=3225 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || |||||| | || ||||| | | Sbjct 3019 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGC 3078 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| | || || | ||| ||||||||| || | || ||||||||| Sbjct 3079 GATACTATCGACAATGTAAAGTCCAAAATCCAGGACAAGGAGGGAATTCCCCCCGACCAG 3138 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| || || |||||||| || ||| |||| || Sbjct 3139 CAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAGGA 3173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445757172635520