Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09-
20] 1,656 sequences; 28,072,829 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq1127 118 9e-22
seq433 93.3 4e-14
seq1641 86.0 6e-12
>seq1127
Length=175000
Score = 118 bits (130), Expect = 9e-22
Identities = 283/418 (68%), Gaps = 10/418 (2%)
Strand=Plus/Minus
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| |||||||| || || ||||| ||||| || ||| || || | || || ||| ||
Sbjct 150876 GCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCCGGCTCATTCGCCTCCATCTTCTGGCTG 150817
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100
||||| || ||| |||||||||| || || || ||||||| | || || || ||||||
Sbjct 150816 AAGAAGCGTGGCTTGATGCCCGGTCTCACTTTCTCCAACGAGCTCATCTCTCGTGACGAG 150757
Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACAT-TGTCAATAAACCGA-CGC 58158
|||||||| ||||| || || ||||| | | ||| ||||| || |||| | |
Sbjct 150756 GGTCTCCACACTGACTTCGCTTGCCTGCTCTTCTCCCACATGAACCACCGCCCCGACCCC 150697
Query 58159 GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCG 58218
||||| | |||||| || |||||| |||| ||||| | ||||| | || |
Sbjct 150696 AAGATCG--TTCAGGACATCATTGTCGAGGCCGTCGGCATCGAGCAGGAGTTCCTGACTG 150639
Query 58219 AAGC-CCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAG 58277
| || | | || | || | | || || |||||| | |||||| |||||||||||
Sbjct 150638 ACGCTCTTCCCTGCGGTC-TTCTTGGCATGAACTCCAAGCTGATGTGCGAGTACATTGAG 150580
Query 58278 TTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGAAAA 58335
|| || || ||| | || || | | || | ||| || | |||||| | | |
Sbjct 150579 TTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGA-AGT-ACTACAACGCTACCA 150522
Query 58336 ATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAAA 58393
| || || || || ||| | ||||| || | |||||||| ||||| ||||| ||
Sbjct 150521 ACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAA 150464
>seq433
Length=43892
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || |||||| | || ||||| | |
Sbjct 1669 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGC 1728
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| | || || | ||| ||||||||| || | || |||||||||
Sbjct 1729 GATACTATCGACAATGTAAAGTCCAAAATCCAGGACAAGGAGGGAATTCCCCCCGACCAG 1788
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || ||||| ||||| || | ||||| || | |||||||||
Sbjct 1789 CAGCGCCTCATCTTCGCAGGCAAGCAACTTGAAGATGGCCGCACCCTCTCAGATTATAAC 1848
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || || ||||| || ||||| || || ||| | || | || ||||
Sbjct 1849 ATCCAGAAGGAATCCACACTTCACCTCGTCCTTCGTCTACGTGGTGGTA 1897
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||||||||| ||||| ||||| || |||||| | || ||||| | ||| | | |||
Sbjct 1451 TCGTAAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCG 1510
Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322
| | || || | ||| ||||||||| || | || || ||||||||||| || |
Sbjct 1511 ACAATGTAAAGTCCAAAATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTCA 1570
Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382
| ||||| ||||| || | ||||| || | ||||||||||| || || |
Sbjct 1571 TCTTCGCAGGCAAGCAACTTGAAGATGGCCGCACCCTCTCAGATTATAACATCCAGAAGG 1630
Query 31383 AATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|||| || ||||| || || ||| | || | || ||||
Sbjct 1631 AATCCACACTTCACCTCGTCCTTCGTCTACGTGGTGGTA 1669
>seq1641
Length=3225
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || |||||| | || ||||| | |
Sbjct 3019 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGC 3078
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| | || || | ||| ||||||||| || | || |||||||||
Sbjct 3079 GATACTATCGACAATGTAAAGTCCAAAATCCAGGACAAGGAGGGAATTCCCCCCGACCAG 3138
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||| || || |||||||| || ||| |||| ||
Sbjct 3139 CAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAGGA 3173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445757172635520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |