Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq833 138 1e-27 seq1127 113 6e-20 >seq833 Length=32517 Score = 138 bits (152), Expect = 1e-27 Identities = 726/1145 (63%), Gaps = 22/1145 (2%) Strand=Plus/Minus Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 63008 || ||||| || || || || ||||||| || | | || | | ||||| |||||| Sbjct 25727 GAAGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACTGTACTCGACGATCTCGGTGCAA 25668 Query 63009 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63068 || || | ||||| || | || | || |||||||| ||||| || |||||| Sbjct 25667 AGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCC 25608 Query 63069 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63128 ||||| || ||||| || ||||||| ||| |||| | || | ||| || | ||||| | Sbjct 25607 TTATAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGA-G 25549 Query 63129 ACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT--TCGTA--TAGAGTATACA 63183 || ||||||| || | || | | ||| | ||||| | ||| | | Sbjct 25548 CTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTCACGTAAAGA 25491 Query 63184 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCA 63243 ||| ||||||| || || |||||| ||| | || || | || || | | Sbjct 25490 G-CGT-CGAACTCATCACCGTAAACATCAGCCAGGCCGGGGGCCTCGTTGGGGCAGAAGA 25433 Query 63244 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 63303 | ||| || |||| ||| || || ||||| |||||||| ||| |||| | ||| Sbjct 25432 GGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGAGTCCACAAAGCGT 25373 Query 63304 TAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 63363 || || || | | | | ||||| || || ||||| |||||||||||| Sbjct 25372 AGAAGAGGTCACGGGCGCGAACCTCCTCCTTACCGTGGTTCTTGCGCAGATCGAGGAACT 25313 Query 63364 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 63423 | | | ||| | ||||| || |||| ||| || || | | ||||| || ||||| | Sbjct 25312 CGAAGACATCGGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTTAC 25253 Query 63424 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGT 63483 | || || || | || | ||||||||||| | || | || ||| |||| |||||||| Sbjct 25252 CACCTTGGTCCACATAGCGTGCGGTGTTATTGAACACGCGCAGCATAGGAACAATACCGT 25193 Query 63484 TTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGA 63541 | || || ||||| || || || || | || ||||| | ||| Sbjct 25192 TGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT-- 25135 Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601 | ||| || || || || | || ||||| | || || || | || || ||||| Sbjct 25134 CAAACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGAT 25075 Query 63602 GCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACG 63658 || || ||||| || || ||| || || || | ||| |||| | || | | Sbjct 25074 ACCCTCAATGCTGTCCGCGCTCACGTCAACCAGGA---AGCAAGACGCAAGCTGAGGTTG 25018 Query 63659 AGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63718 | ||| | ||||| || | || || || ||||| || || | || | || | | Sbjct 25017 GGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGAACTTCTGGGACATCAA 24958 Query 63719 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63778 | ||| |||||||| || || |||||| |||||||| || || |||||||| Sbjct 24957 GTGGTATGTCTCAATGGCCTTTTCAATATCCTCGCCGTGAATTCCGACAGCAACACGCAT 24898 Query 63779 TAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63838 | || ||||||||| | ||| ||| ||| ||| || | | ||| || || Sbjct 24897 CAGCAAGTGCTGAGGACGCTCAGCAACGTTGCCGTTAATCCGAAGAAGGTATGAACGCTC 24838 Query 63839 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898 | ||| || || || || ||||||| ||||| || ||||| | ||| |||| || Sbjct 24837 GAGAGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTT 24778 Query 63899 GAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATAC-TTGAAATAATCGGAGAAT 63957 ||||| || || || |||| || | | | || | | |||| || || |||| | Sbjct 24777 GAGCTCTTCGGCATGCTTCATAACGATCT-CGTAGTGTTCCTTTGAGATCATAGGAGCAG 24719 Query 63958 GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 64017 | || || || || || ||||||| | | | || || || ||| | | Sbjct 24718 GCTTATTGTTCTTGGGGTTCACATAGTGGTAGAGGTCGGAAATGACCATGGAGAATTGCT 24659 Query 64018 tttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCG 64077 |||| |||| |||||| ||||| || | ||| || | || || ||||||||||| || | Sbjct 24658 TTTTGGTTTGCTTGTGGAGATTCGAAACGGCGATACGTGCAGCCAGAATGGCATAGTCGG 24599 Query 64078 GATGT 64082 | ||| Sbjct 24598 GGTGT 24594 >seq1127 Length=175000 Score = 113 bits (124), Expect = 6e-20 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || ||||| || ||| ||||||||||| | | || | ||||| || || ||||| Sbjct 150734 CAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGA 150793 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 |||||||| | ||||||||| || ||||| || ||||| |||||||| ||||| |||||| Sbjct 150794 CCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAG 150853 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAA 33726 || || || || || || ||||||| Sbjct 150854 ATACCCTCAACAGCGGCGAAGGCAA 150878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629804562775680