Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09-
20] 1,656 sequences; 28,072,829 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq833 138 1e-27
seq1127 113 6e-20
>seq833
Length=32517
Score = 138 bits (152), Expect = 1e-27
Identities = 726/1145 (63%), Gaps = 22/1145 (2%)
Strand=Plus/Minus
Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 63008
|| ||||| || || || || ||||||| || | | || | | ||||| ||||||
Sbjct 25727 GAAGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACTGTACTCGACGATCTCGGTGCAA 25668
Query 63009 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63068
|| || | ||||| || | || | || |||||||| ||||| || ||||||
Sbjct 25667 AGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCC 25608
Query 63069 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63128
||||| || ||||| || ||||||| ||| |||| | || | ||| || | ||||| |
Sbjct 25607 TTATAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGA-G 25549
Query 63129 ACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT--TCGTA--TAGAGTATACA 63183
|| ||||||| || | || | | ||| | ||||| | ||| | |
Sbjct 25548 CTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTCACGTAAAGA 25491
Query 63184 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCA 63243
||| ||||||| || || |||||| ||| | || || | || || | |
Sbjct 25490 G-CGT-CGAACTCATCACCGTAAACATCAGCCAGGCCGGGGGCCTCGTTGGGGCAGAAGA 25433
Query 63244 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 63303
| ||| || |||| ||| || || ||||| |||||||| ||| |||| | |||
Sbjct 25432 GGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGAGTCCACAAAGCGT 25373
Query 63304 TAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 63363
|| || || | | | | ||||| || || ||||| ||||||||||||
Sbjct 25372 AGAAGAGGTCACGGGCGCGAACCTCCTCCTTACCGTGGTTCTTGCGCAGATCGAGGAACT 25313
Query 63364 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 63423
| | | ||| | ||||| || |||| ||| || || | | ||||| || ||||| |
Sbjct 25312 CGAAGACATCGGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTTAC 25253
Query 63424 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGT 63483
| || || || | || | ||||||||||| | || | || ||| |||| ||||||||
Sbjct 25252 CACCTTGGTCCACATAGCGTGCGGTGTTATTGAACACGCGCAGCATAGGAACAATACCGT 25193
Query 63484 TTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGA 63541
| || || ||||| || || || || | || ||||| | |||
Sbjct 25192 TGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT-- 25135
Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601
| ||| || || || || | || ||||| | || || || | || || |||||
Sbjct 25134 CAAACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGAT 25075
Query 63602 GCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACG 63658
|| || ||||| || || ||| || || || | ||| |||| | || | |
Sbjct 25074 ACCCTCAATGCTGTCCGCGCTCACGTCAACCAGGA---AGCAAGACGCAAGCTGAGGTTG 25018
Query 63659 AGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAG 63718
| ||| | ||||| || | || || || ||||| || || | || | || | |
Sbjct 25017 GGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGAACTTCTGGGACATCAA 24958
Query 63719 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63778
| ||| |||||||| || || |||||| |||||||| || || ||||||||
Sbjct 24957 GTGGTATGTCTCAATGGCCTTTTCAATATCCTCGCCGTGAATTCCGACAGCAACACGCAT 24898
Query 63779 TAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63838
| || ||||||||| | ||| ||| ||| ||| || | | ||| || ||
Sbjct 24897 CAGCAAGTGCTGAGGACGCTCAGCAACGTTGCCGTTAATCCGAAGAAGGTATGAACGCTC 24838
Query 63839 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATT 63898
| ||| || || || || ||||||| ||||| || ||||| | ||| |||| ||
Sbjct 24837 GAGAGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTT 24778
Query 63899 GAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATAC-TTGAAATAATCGGAGAAT 63957
||||| || || || |||| || | | | || | | |||| || || |||| |
Sbjct 24777 GAGCTCTTCGGCATGCTTCATAACGATCT-CGTAGTGTTCCTTTGAGATCATAGGAGCAG 24719
Query 63958 GTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 64017
| || || || || || ||||||| | | | || || || ||| | |
Sbjct 24718 GCTTATTGTTCTTGGGGTTCACATAGTGGTAGAGGTCGGAAATGACCATGGAGAATTGCT 24659
Query 64018 tttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCG 64077
|||| |||| |||||| ||||| || | ||| || | || || ||||||||||| || |
Sbjct 24658 TTTTGGTTTGCTTGTGGAGATTCGAAACGGCGATACGTGCAGCCAGAATGGCATAGTCGG 24599
Query 64078 GATGT 64082
| |||
Sbjct 24598 GGTGT 24594
>seq1127
Length=175000
Score = 113 bits (124), Expect = 6e-20
Identities = 112/145 (77%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| ||||| || ||| ||||||||||| | | || | ||||| || || |||||
Sbjct 150734 CAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGA 150793
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|||||||| | ||||||||| || ||||| || ||||| |||||||| ||||| ||||||
Sbjct 150794 CCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAG 150853
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAA 33726
|| || || || || || |||||||
Sbjct 150854 ATACCCTCAACAGCGGCGAAGGCAA 150878
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629804562775680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |