Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09-
20] 1,656 sequences; 28,072,829 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1127 89.7 5e-13
seq1641 87.8 2e-12
seq433 87.8 2e-12
>seq1127
Length=175000
Score = 89.7 bits (98), Expect = 5e-13
Identities = 157/226 (69%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCC-GTATCATTGTTGGG 52895
|||||||||| ||| || | ||||| | || |||||| | ||| | || ||||
Sbjct 150672 GAGGCCGTCGGCATCGAGCAGGAGTTCCTGACTGACGCTCTTCCCTGCGGTCTTCTTGG- 150614
Query 52896 CATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCA 52955
||||||| | | |||||||||||||||| ||||| || || ||| | ||| || ||
Sbjct 150613 CATGAACTCCAAGCTGATGTGCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGC 150554
Query 52956 GCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATC 53015
||||| | ||| ||||| || || |||||||| || ||| | ||| ||
Sbjct 150553 CCTCGGCAACAAGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTC 150494
Query 53016 GCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061
|| | ||||| || ||||| ||||||| ||||| || || |||
Sbjct 150493 CCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 150448
>seq1641
Length=3225
Score = 87.8 bits (96), Expect = 2e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| ||||| || || ||||||||||| | || | || || ||||| ||||||
Sbjct 3215 GTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGCTGCTTACCA 3156
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
|| |||| || || ||||| ||||| || || || || ||||| |||||| |||
Sbjct 3155 GCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTT 3096
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | || | || ||| ||| ||| ||||||| ||| | |||||||| || | ||
Sbjct 3095 ACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTC 3036
Query 139748 TTTACGAATATTTGCATA 139765
|| ||||| || ||||||
Sbjct 3035 TTGACGAAGATCTGCATA 3018
>seq433
Length=43892
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || |||| ||| | || | ||||| || || || || || |||||||||||
Sbjct 1895 CCACCACGTAGACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAG 1836
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| || || || || || |||| || || ||||| ||||| ||
Sbjct 1835 AGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 1776
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || ||||| |||||| |||| | || | || ||| ||| ||| |||
Sbjct 1775 ATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACC 1716
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
|||| ||| | |||||||| || | || || ||||| || ||||||
Sbjct 1715 TCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATA 1668
Score = 86.0 bits (94), Expect = 6e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || |||| ||| | || | ||||| || || || || || |||||||||||
Sbjct 1667 CCACCACGTAGACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAG 1608
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| || || || || || |||| || || ||||| || || ||
Sbjct 1607 AGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 1548
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| || || ||||| |||||| |||| | || | || ||| ||| ||| |||
Sbjct 1547 ATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACC 1488
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGA 139754
|||| ||| | ||||||||||||| || |||||||
Sbjct 1487 TCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTTACGA 1451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496053731475200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |