Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq1127 89.7 5e-13 seq1641 87.8 2e-12 seq433 87.8 2e-12 >seq1127 Length=175000 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCC-GTATCATTGTTGGG 52895 |||||||||| ||| || | ||||| | || |||||| | ||| | || |||| Sbjct 150672 GAGGCCGTCGGCATCGAGCAGGAGTTCCTGACTGACGCTCTTCCCTGCGGTCTTCTTGG- 150614 Query 52896 CATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCA 52955 ||||||| | | |||||||||||||||| ||||| || || ||| | ||| || || Sbjct 150613 CATGAACTCCAAGCTGATGTGCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGC 150554 Query 52956 GCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATC 53015 ||||| | ||| ||||| || || |||||||| || ||| | ||| || Sbjct 150553 CCTCGGCAACAAGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTC 150494 Query 53016 GCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || | ||||| || ||||| ||||||| ||||| || || ||| Sbjct 150493 CCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 150448 >seq1641 Length=3225 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || ||||| || || ||||||||||| | || | || || ||||| |||||| Sbjct 3215 GTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGCTGCTTACCA 3156 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 || |||| || || ||||| ||||| || || || || ||||| |||||| ||| Sbjct 3155 GCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTT 3096 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | || | || ||| ||| ||| ||||||| ||| | |||||||| || | || Sbjct 3095 ACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTC 3036 Query 139748 TTTACGAATATTTGCATA 139765 || ||||| || |||||| Sbjct 3035 TTGACGAAGATCTGCATA 3018 >seq433 Length=43892 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || |||| ||| | || | ||||| || || || || || ||||||||||| Sbjct 1895 CCACCACGTAGACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAG 1836 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| || || || || || |||| || || ||||| ||||| || Sbjct 1835 AGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 1776 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| |||||| |||| | || | || ||| ||| ||| ||| Sbjct 1775 ATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACC 1716 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765 |||| ||| | |||||||| || | || || ||||| || |||||| Sbjct 1715 TCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCATA 1668 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || |||| ||| | || | ||||| || || || || || ||||||||||| Sbjct 1667 CCACCACGTAGACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAG 1608 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||||| || || || || || |||| || || ||||| || || || Sbjct 1607 AGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 1548 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| |||||| |||| | || | || ||| ||| ||| ||| Sbjct 1547 ATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACC 1488 Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGA 139754 |||| ||| | ||||||||||||| || ||||||| Sbjct 1487 TCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTTACGA 1451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496053731475200