Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq1641 93.3 4e-14 seq433 84.2 2e-11 >seq1641 Length=3225 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 94801 CAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAG 94860 || ||||| || || ||||| || | ||||||||| | || | ||||||||| Sbjct 3225 CAGGTGCAGTGTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAG 3166 Query 94861 CTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAAT 94920 ||| || || | ||||| | | ||||| || || ||||| || || ||||| | || Sbjct 3165 CTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGAT 3106 Query 94921 TTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTTTT 94978 ||| | ||| || | ||| ||| || || ||| || || |||| |||||||| || Sbjct 3105 TTTGGACTTTACATTGTCGATAGTATC-GC-TGGACTCAACCTCAAGGGTGATGGTCTTG 3048 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || || || ||||||||||| Sbjct 3047 CCAGTAAGGGTCTTGACGAAGATCTGCAT 3019 >seq433 Length=43892 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870 || |||||||| || | ||||||||| | ||| | ||| || || || || || Sbjct 1865 GTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCT 1806 Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930 | ||||| | | ||||| || || ||||| || || ||||| | ||||| | ||| Sbjct 1805 GCGAAGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTT 1746 Query 94931 ACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 || | ||| ||| || || ||| || || |||| |||||||| || |||||||| | Sbjct 1745 ACATTGTCGATAGTATC-GC-TGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGG 1688 Query 94989 TTTTCACAAAGATCTGCAT 95007 | || || ||||||||||| Sbjct 1687 TCTTGACGAAGATCTGCAT 1669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448281920372160