Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq680 176 7e-40 seq542 170 3e-38 >seq680 Length=3391 Score = 176 bits (194), Expect = 7e-40 Identities = 202/269 (75%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| ||||| | || || |||||||| |||||||||||||| |||| Sbjct 1134 CGCCAAGCGCCACCGCAAGATCT-TGCGTGACAACATCCAGGGAATCACCAAGCCTGCTA 1076 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| || ||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 1075 TCCGTCGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGA 1016 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| | ||| |||||| || | || |||| ||| || || || || | Sbjct 1015 CCCGCGGTGTGCTCAAGTCCTTCCTTGAGTCTGTCATCCGTGACGCCGTCACATACACTG 956 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||||||||| |||||||| ||||| || | || ||||||| || | || || || | Sbjct 955 AGCACGCTAAGCGTAAGACCGTCACTTCTCTCGACGTCGTCTACGCCCTCAAGCGCCAGG 896 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | || ||||| || ||||| Sbjct 895 GCCGTACTCTCTACGGTTTCGGTGGTTAA 867 >seq542 Length=19150 Score = 170 bits (188), Expect = 3e-38 Identities = 190/251 (76%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || ||||| || ||||| |||||||| ||||| Sbjct 16166 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATTACCAAGCCCGCTAT 16108 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| || ||||||||||| ||||||||| |||| | || |||| || |||| Sbjct 16107 CCGTCGTCTCGCACGTCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 16048 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||||| || || |||| ||||||| | ||| || || Sbjct 16047 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGATGCTGTTACCTACACTGA 15988 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| || | || | ||||| || | || || || || Sbjct 15987 GCACGCCAAGCGCAAGACCGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 15928 Query 16672 CCGTAAGATTT 16682 ||||||| ||| Sbjct 15927 CCGTAAGTTTT 15917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073685907608