Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq833 141 1e-28 seq1127 104 3e-17 >seq833 Length=32517 Score = 141 bits (156), Expect = 1e-28 Identities = 727/1145 (63%), Gaps = 22/1145 (2%) Strand=Plus/Minus Query 62753 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62812 || ||||| || || || || ||||||| || | | || | | ||||| |||||| Sbjct 25727 GAAGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACTGTACTCGACGATCTCGGTGCAA 25668 Query 62813 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 62872 || || | || || || | || | || |||||||| ||||| || |||||| Sbjct 25667 AGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCC 25608 Query 62873 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 62932 ||||| || ||||| || ||||||| ||| |||| | || | ||| || | ||||| | Sbjct 25607 TTATAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGA-G 25549 Query 62933 ACTC-GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATACA 62987 || ||||||| || | || | | ||| | ||||| | ||| | | Sbjct 25548 CTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTCACGTAAAGA 25491 Query 62988 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCA 63047 ||| ||||||| || || |||||| |||| || || || | || || | | Sbjct 25490 G-CGT-CGAACTCATCACCGTAAACATCAGCCAGGCCGGGGGCCTCGTTGGGGCAGAAGA 25433 Query 63048 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 63107 | ||| || |||| ||| || || ||||| |||||||| ||| |||| | ||| Sbjct 25432 GGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGAGTCCACAAAGCGT 25373 Query 63108 TAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 63167 || || || | || | | ||||| || || ||||| |||||||||||| Sbjct 25372 AGAAGAGGTCACGGGCGCGAACCTCCTCCTTACCGTGGTTCTTGCGCAGATCGAGGAACT 25313 Query 63168 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 63227 | | | ||| | ||||| || |||| ||| || || | | ||||| || ||||| | Sbjct 25312 CGAAGACATCGGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTTAC 25253 Query 63228 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 63287 | || || || | || | ||||||||||| | || | || ||| |||| |||||| | Sbjct 25252 CACCTTGGTCCACATAGCGTGCGGTGTTATTGAACACGCGCAGCATAGGAACAATACCGT 25193 Query 63288 TGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGA 63345 |||| | || ||||| || || || || | || ||||| | ||| Sbjct 25192 TGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT-- 25135 Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 63405 | ||| || || || || | || ||||| | || || || | ||||| ||||| Sbjct 25134 CAAACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCGTAGAT 25075 Query 63406 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGGTGACG 63462 ||||| || || || | ||| || || || | ||| |||| | || | | Sbjct 25074 ACCCTCAATGCTGTCCGCGCTCACGTCAACCAGGA---AGCAAGACGCAAGCTGAGGTTG 25018 Query 63463 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAG 63522 ||| | ||||| || | || || || |||||||| || | || | || | | Sbjct 25017 GGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGAACTTCTGGGACATCAA 24958 Query 63523 ATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCAT 63582 | ||| |||||||| || || |||||| |||||||| || || |||||||| Sbjct 24957 GTGGTATGTCTCAATGGCCTTTTCAATATCCTCGCCGTGAATTCCGACAGCAACACGCAT 24898 Query 63583 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63642 | || ||||||||| | ||| | | ||| ||| || | | ||| || || Sbjct 24897 CAGCAAGTGCTGAGGACGCTCAGCAACGTTGCCGTTAATCCGAAGAAGGTATGAACGCTC 24838 Query 63643 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63702 | ||| || || || || ||||||| ||||| || ||||| | ||| ||||||| Sbjct 24837 GAGAGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGCCGAGTT 24778 Query 63703 GAGTTTATCCTTATATTTGTTAACTACATCCATGGTAATAC-TTGAAATAATAGGAAAAT 63761 ||| | || || || |||| | | | | || | | |||| || |||||| | Sbjct 24777 GAGCTCTTCGGCATGCTTCATAACGATCT-CGTAGTGTTCCTTTGAGATCATAGGAGCAG 24719 Query 63762 GTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtt 63821 | || || || || || ||||||| | | | || || || ||| | | Sbjct 24718 GCTTATTGTTCTTGGGGTTCACATAGTGGTAGAGGTCGGAAATGACCATGGAGAATTGCT 24659 Query 63822 tttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCG 63881 |||| |||| ||||| ||||| || ||||| || | || || ||||||||||| || | Sbjct 24658 TTTTGGTTTGCTTGTGGAGATTCGAAACGGCGATACGTGCAGCCAGAATGGCATAGTCGG 24599 Query 63882 GATGT 63886 | ||| Sbjct 24598 GGTGT 24594 >seq1127 Length=175000 Score = 104 bits (114), Expect = 3e-17 Identities = 110/145 (76%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || ||||| || ||| ||||||||||| | | || | |||||||| || ||||| Sbjct 150734 CAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGA 150793 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 |||||||| | ||||||||| || ||||| || ||||| || ||||| || || ||||| Sbjct 150794 CCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAG 150853 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAA 32805 || || || || || || ||||||| Sbjct 150854 ATACCCTCAACAGCGGCGAAGGCAA 150878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633618883817600