Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq433 113 4e-20 seq1641 107 2e-18 seq801 86.0 5e-12 >seq433 Length=43892 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| ||||| || || ||| | Sbjct 1669 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGC 1728 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || | || ||||| || ||||||||||| ||||| ||||| || Sbjct 1729 GATACTATCGACAATGTAAAGTCCAAAATCCAGGACAAGGAGGGAATTCCCCCCGACCAG 1788 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| || | || ||| ||||||| |||| ||||| ||| Sbjct 1789 CAGCGCCTCATCTTCGCAGGCAAGCAACTTGAAGATGGCCGCACCCTCTCAGATTATAAC 1848 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || |||||||| Sbjct 1849 ATCCAGAAGGAATCCAC 1865 Score = 105 bits (116), Expect = 6e-18 Identities = 127/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| || || ||| |||||| | ||| || | || Sbjct 1465 ACCGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAATGTAAAGTCC 1524 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| || ||||||||||| ||||| || || || || || || || || || ||||| Sbjct 1525 AAAATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTCATCTTCGCAGGCAAG 1584 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 || | || ||| ||||||| |||| ||||| ||||| || || |||||||| Sbjct 1585 CAACTTGAAGATGGCCGCACCCTCTCAGATTATAACATCCAGAAGGAATCCAC 1637 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || ||| |||||| | ||| || | || Sbjct 1183 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAATGTAAAGTCC 1242 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 ||||| || ||||||||||| ||||| ||||| || || || || || || || ||||| Sbjct 1243 AAAATCCAGGACAAGGAGGGAATTCCCCCCGACCAGCAGCGCCTCATCTTCGCAGGCAAG 1302 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 || | || ||| |||||| | || || || ||||| || || |||||||| Sbjct 1303 CAACTTGAAGATGGTCGCACCTTGTCGGACTATAACATCCAGAAGGAATCCAC 1355 >seq1641 Length=3225 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| ||||| || || ||| | Sbjct 3019 ATGCAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGC 3078 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 ||||| | ||| || | || ||||| || ||||||||||| ||||| ||||| || Sbjct 3079 GATACTATCGACAATGTAAAGTCCAAAATCCAGGACAAGGAGGGAATTCCCCCCGACCAG 3138 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || || || ||| | |||||| ||| ||| | || ||||| ||| Sbjct 3139 CAGCGCCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACCCTTTCGGATTATAAC 3198 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 3199 ATCCAGAAGGAGTCCAC 3215 >seq801 Length=61771 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || | || || || || || | | ||| ||| | Sbjct 22323 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 22382 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| || |||| || || || || |||||||||||||| || || || || || || Sbjct 22383 CGACAATGTCAAGACCAAGATCCAGGATAAGGAGGGTATTCCCCCTGACCAGCAGCGCCT 22442 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || |||||||| ||| | |||||| ||||||| | ||| |||||||| || || Sbjct 22443 GATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 22502 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419719528839640