Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1127 129 1e-24 seq1524 95.1 2e-14 seq248 89.7 1e-12 >seq1127 Length=175000 Score = 129 bits (142), Expect = 1e-24 Identities = 275/405 (68%), Gaps = 12/405 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| || Sbjct 150467 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTA 150526 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || | | |||||| || || ||||| | Sbjct 150527 GCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATG 150586 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 |||| | |||||| | ||||||||||||| | || || |||| || ||| | | Sbjct 150587 TACTCGCACATCAGCTTGGAGTTCATGCCAAGAAGACCGCAGGGAAGAGCGTCAGTCAGG 150646 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCA----CCTGTGCCAGAGA 251798 || |||| ||| || | || ||||| | | || ||| | | || | | | Sbjct 150647 AACTCCTGCTCGATGCCGACGGCCTCGACAATGATGTCCTGAACGATCTTGGGGTCGGGG 150706 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGA-GCTCGCCAA-ACTGTTGGTGCAGACCCTCG 251856 | | | ||| || | ||| | || | || || || | || ||| ||||||||| Sbjct 150707 C-GGTGGTT---CATGTGGGAGAAGAGCAGGCAAGCGAAGTCAGT--GTGGAGACCCTCG 150760 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| ||||| ||||||||| | | || || ||||||| ||||| ||| | ||| Sbjct 150761 TCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCGGGCATCAAGCCACGCTTCTTCAGC 150820 Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||||||| | | || || || ||||| | | |||||| ||| Sbjct 150821 CAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCCTCAACA 150865 >seq1524 Length=110582 Score = 95.1 bits (104), Expect = 2e-14 Identities = 364/568 (64%), Gaps = 14/568 (2%) Strand=Plus/Plus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTC----TCGCGGTATGATGTGGAGCGTTCTAT 218573 ||||||||| ||||||||||||| || ||| | |||| || || | ||||| || Sbjct 17944 GACTTCATCAACAAGGAGCTCATCCTGTTCAGTATGGCGG-ATAATC---AACGTTCGAT 17999 Query 218574 TCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAA 218633 ||| ||| || |||||| | |||||| ||||| ||| | || || ||| Sbjct 18000 TCCTTCCGTTGTCGATGGCTTAAAGCCAGGTCAGCGCAAGGTGCTTCACACCTGTTTCCG 18059 Query 218634 GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTC 218693 || || ||| | || || ||||| | | || | | || ||||||||| || | Sbjct 18060 CCGCAATCTGAAGAAGGACATGAAGGTGGTTGAGCTGGCAGGACATGTATCCGGAACGAC 18119 Query 218694 TGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTA 218753 | |||||| ||||| || || || |||| || || | || ||| || Sbjct 18120 AGCCTACCACCACGGCGATGTCTCCCTTCAACAAACCATCGTTGGTCTTGCCCAGACCTT 18179 Query 218754 TGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATT 218813 ||| ||| |||||||| |||| ||| || | || | |||||| ||| || Sbjct 18180 TGTTGGCTCCAACAACATCAACTGCCTGGAGCCTAGTGGAAACTTTGGTAGTCGACTTCA 18239 Query 218814 GGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCG 218873 ||||| ||| |||| || | || |||| || |||| ||| | | || Sbjct 18240 AGGTGGTGGCGATTGTGCCAGCGCTCGTTACATCTACACTCGCCTGTCCCCCTTTGCACG 18299 Query 218874 CCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTC 218933 | |||| ||| || ||||||||| ||| || | |||| || |||||||| Sbjct 18300 CAAGGTCTTCCATGCGGCCGATGAACCGCTTCTGACGTATAACGAAGACGATGGCAAGAA 18359 Query 218934 GATTGAGCCCGAGTGGTATGTGCCTGCTATTCC---GTTTTTGCTCGTAAATGGTGCCAA 218990 ||||||||||||| | |||||||| | || | ||||| || || || ||| | Sbjct 18360 GATTGAGCCCGAGGTCTTTGTGCCTGTCGTCCCCATGATTTTGATC---AACGGCGCCGA 18416 Query 218991 TGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCAAGGACATCATTGA 219050 ||||| || || || | ||| || ||||| |||||||| |||| || | | Sbjct 18417 CGGTATTGGAACTGGTTGGAGTTCTTCTATTCCCAACTACAATCCTGAGGATATTGTGAA 18476 Query 219051 CAACGTCAAGCGTCTCATATCTGGCAAG 219078 |||| ||||||| || || ||||| || Sbjct 18477 CAACCTCAAGCGACTGATGGCTGGCGAG 18504 >seq248 Length=5266 Score = 89.7 bits (98), Expect = 1e-12 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 279369 TTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGT 279428 ||||| || || || |||| ||||||||||| ||| || | | | |||||||| Sbjct 1617 TTCTCCCTTGCTTACGGTGCCAAGATTCTGCTGAACCAGACTCACTTGCGTCTCAAGCGT 1558 Query 279429 GGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCC 279488 || | || || |||||| |||| ||||| || | || |||| ||| || ||||| ||| Sbjct 1557 GGTCAGCGTTACGGTCTCCTCGGCCCCAACGGTTCCGGAAAGACCACCCTCATGCGTGCC 1498 Query 279489 ATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCATCTGAGGTAAGGACAGTGTATGTA 279548 || |||| ||||| || || || || || |||||| | ||| || || || Sbjct 1497 ATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAGGATGAGGTCAAGACCGTTTACGTC 1438 Query 279549 GAGCACGACATCGACTC 279565 |||||||| ||||||| Sbjct 1437 GAGCACGATCTCGACTC 1421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027814991872696