Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq433 152 9e-32 seq1127 149 1e-30 seq1641 147 4e-30 seq801 120 6e-22 seq248 91.5 3e-13 >seq433 Length=43892 Score = 152 bits (168), Expect = 9e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||| || || |||||||||||||| ||| Sbjct 1895 CCACCACGTAGACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAG 1836 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| || ||||| ||||| | || |||||||| ||| Sbjct 1835 AGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 1776 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 || || |||||||| || || || | ||| || ||||| || || |||| | || || Sbjct 1775 ATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATC-GCTGGACTCAAC 1717 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||||||| || || || |||||||||||||| |||||||| Sbjct 1716 CTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 1669 Score = 129 bits (142), Expect = 1e-24 Identities = 161/218 (74%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | || | ||| || ||||| || || |||||||||||||| ||| Sbjct 1667 CCACCACGTAGACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAG 1608 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | ||||| || ||||| ||||| | || ||||| || ||| Sbjct 1607 AGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 1548 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || || || | ||| || ||||| || || ||| || || || Sbjct 1547 ATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATC-GCTGGACTCAAC 1489 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 || | ||||||||| || || || |||||||| |||| Sbjct 1488 CTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTTACGA 1451 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| ||||| || || ||| ||| || |||||||| || || || Sbjct 2123 CCACCACGCAGACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 2064 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | || ||||| || ||| Sbjct 2063 AGAGTACGTCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 2004 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| ||||||||||| || ||| ||||| ||||||| || || Sbjct 2003 ATTCCCTCCTTATCTTGAATCTTGCTTTTCACGTTGTCGATAGTGTCTGAACTCTCAACC 1944 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| || ||||| || | ||||||||| || || ||||| Sbjct 1943 TCCAGTGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1897 Score = 113 bits (124), Expect = 8e-20 Identities = 150/206 (73%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | ||| || ||||| || || ||||||||||| || || Sbjct 1385 CCACCACGGAGGCGGAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAGTCCGAC 1326 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | ||||| || ||||| ||||| | || |||||||| ||| Sbjct 1325 AAGGTGCGACCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 1266 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 || || |||||||| || || || | ||| || ||||| || || ||| || || || Sbjct 1265 ATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATC-GCTGGACTCAAC 1207 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439 || | ||||||||| || || |||| Sbjct 1206 CTCAAGGGTGATGGTCTTGCCAGTGA 1181 >seq1127 Length=175000 Score = 149 bits (164), Expect = 1e-30 Identities = 299/441 (68%), Gaps = 12/441 (3%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| || ||||||||||| || || || |||||||||||||| |||||| | Sbjct 150430 CATGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 150489 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 ||||| ||| |||||||||||| |||||||| ||| | | ||| || || Sbjct 150490 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCC 150549 Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114 ||| || | | ||||||||| |||||||| ||||||| || |||||| | ||||| Sbjct 150550 GAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTT 150609 Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174 |||||||| | | |||||| | ||||| | ||| |||| ||| || |||| || Sbjct 150610 CATGCCAAGAAGACCGCAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGC 150669 Query 10175 TTCCTCGACGATGCTCTTTACCA------CGTCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228 || | | |||| || || | ||| ||| | | | |||| | | || Sbjct 150670 CTCGACAATGATGTCCTGAACGATCTTGGGGTC--GGGGC-GGTGGTTC---ATGTGGGA 150723 Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288 | || || | || | |||||| |||||||| || ||||| ||||||||| Sbjct 150724 GAAGAGCAGGCAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGA 150783 Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348 ||| ||||||||||| | || || || ||||||||| |||| | ||| || || Sbjct 150784 GAAAGTGAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCC 150843 Query 10349 GGAGAACAGAAGACCCTCCAC 10369 |||||| | | |||||| || Sbjct 150844 GGAGAAGAAGATACCCTCAAC 150864 Score = 89.7 bits (98), Expect = 9e-13 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682 |||||||| | || || || ||| | | || |||||| | || | ||| ||||||| Sbjct 151174 AGGTTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCCAGAACGTGGGAGATGAAG 151233 Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742 | ||||||||||||||||| | ||||||| | ||||| | ||| | | | Sbjct 151234 TAACGCTCATCATCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATC 151293 Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786 ||||| |||||||||||| || |||||||||||||||| || Sbjct 151294 TCCTCGGCGGTCCAGAAAGAAGCTTCGGCCTTCTTGTACATTTG 151337 >seq1641 Length=3225 Score = 147 bits (162), Expect = 4e-30 Identities = 159/208 (76%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 68255 CAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAA 68314 || ||| || |||||||| || |||||||||||||| || || || | ||||| || | Sbjct 3225 CAGGTGCAGTGTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAG 3166 Query 68315 CTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAAT 68374 |||||| || ||||| || || | || |||||||| ||||| || |||||||| || || Sbjct 3165 CTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGAT 3106 Query 68375 CTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTACTTCCAAGGTGATGGTTTTTC 68433 || | ||| || ||||| || || |||| | || || || | ||||||||| || | Sbjct 3105 TTTGGACTTTACATTGTCGATAGTATC-GCTGGACTCAACCTCAAGGGTGATGGTCTTGC 3047 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || |||||||||||||| |||||||| Sbjct 3046 CAGTAAGGGTCTTGACGAAGATCTGCAT 3019 >seq801 Length=61771 Score = 120 bits (132), Expect = 6e-22 Identities = 136/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || |||||||| || ||| || || | ||||| || | |||||| |||||||| || Sbjct 22502 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 22443 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || ||||| || ||||| || || ||||| | |||||| ||| Sbjct 22442 AGGCGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTGGTCTTGACATTGTCG 22383 Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| ||| || || || || | ||| ||||| || ||||| |||||||||||||| Sbjct 22382 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 22324 >seq248 Length=5266 Score = 91.5 bits (100), Expect = 3e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 225779 TCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCA 225838 ||||| || ||||| || ||| || || | | |||||| ||||| ||||| | Sbjct 1430 TCGTGCTCGACGTAAACGGTCTTGACCTCATCCTTCTTGGGGAAACCCTCAAGCTGCTCG 1489 Query 225839 TTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAA 225898 || || ||||| | ||||| |||| || | |||||||| |||| ||| |||||| Sbjct 1490 TTGTTGATGGCACGCATGAGGGTGGTCTTTCCGGAACCGTTGGGGCCGAGGAGACCGTAA 1549 Query 225899 TGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCA 225958 | | || ||||||| | | | || |||||| || |||||| |||| || ||| Sbjct 1550 CGCTGACCACGCTTGAGACGCAAGTGAGTCTGGTTCAGCAGAATCTTGGCACCGTAAGCA 1609 Query 225959 AGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996 |||||||| ||| | ||| ||||| |||| ||||| Sbjct 1610 AGGGAGAATGTGCAGTTGCAAAGGTCAACACCTTCCTC 1647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921603322416320