Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09-
20] 1,656 sequences; 28,072,829 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq433 152 9e-32
seq1127 149 1e-30
seq1641 147 4e-30
seq801 120 6e-22
seq248 91.5 3e-13
>seq433
Length=43892
Score = 152 bits (168), Expect = 9e-32
Identities = 172/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || ||||| || || |||||||||||||| |||
Sbjct 1895 CCACCACGTAGACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAG 1836
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | ||||| || ||||| ||||| | || |||||||| |||
Sbjct 1835 AGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 1776
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413
|| || |||||||| || || || | ||| || ||||| || || |||| | || ||
Sbjct 1775 ATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATC-GCTGGACTCAAC 1717
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||||||||| || || || |||||||||||||| ||||||||
Sbjct 1716 CTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 1669
Score = 129 bits (142), Expect = 1e-24
Identities = 161/218 (74%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || ||||| || || |||||||||||||| |||
Sbjct 1667 CCACCACGTAGACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAG 1608
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| | ||||| || ||||| ||||| | || ||||| || |||
Sbjct 1607 AGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCCGGGGGA 1548
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|| || |||||||| || || || | ||| || ||||| || || ||| || || ||
Sbjct 1547 ATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATC-GCTGGACTCAAC 1489
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451
|| | ||||||||| || || || |||||||| ||||
Sbjct 1488 CTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTTACGA 1451
Score = 125 bits (138), Expect = 1e-23
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || |||| ||||| || || ||| ||| || |||||||| || || ||
Sbjct 2123 CCACCACGCAGACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 2064
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || || | || ||||| || |||
Sbjct 2063 AGAGTACGTCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 2004
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||| ||||||||||| || ||| ||||| ||||||| || ||
Sbjct 2003 ATTCCCTCCTTATCTTGAATCTTGCTTTTCACGTTGTCGATAGTGTCTGAACTCTCAACC 1944
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| ||||| || ||||| || | ||||||||| || || |||||
Sbjct 1943 TCCAGTGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1897
Score = 113 bits (124), Expect = 8e-20
Identities = 150/206 (73%), Gaps = 2/206 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || ||||| | || | ||| || ||||| || || ||||||||||| || ||
Sbjct 1385 CCACCACGGAGGCGGAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAGTCCGAC 1326
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| || | |||||||| | ||||| || ||||| ||||| | || |||||||| |||
Sbjct 1325 AAGGTGCGACCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGA 1266
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413
|| || |||||||| || || || | ||| || ||||| || || ||| || || ||
Sbjct 1265 ATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATC-GCTGGACTCAAC 1207
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGA 68439
|| | ||||||||| || || ||||
Sbjct 1206 CTCAAGGGTGATGGTCTTGCCAGTGA 1181
>seq1127
Length=175000
Score = 149 bits (164), Expect = 1e-30
Identities = 299/441 (68%), Gaps = 12/441 (3%)
Strand=Plus/Plus
Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994
|||||| || ||||||||||| || || || |||||||||||||| |||||| |
Sbjct 150430 CATGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGC 150489
Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054
||||| ||| |||||||||||| |||||||| ||| | | ||| || ||
Sbjct 150490 CAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCC 150549
Query 10055 GAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTT 10114
||| || | | ||||||||| |||||||| ||||||| || |||||| | |||||
Sbjct 150550 GAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTT 150609
Query 10115 CATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGC 10174
|||||||| | | |||||| | ||||| | ||| |||| ||| || |||| ||
Sbjct 150610 CATGCCAAGAAGACCGCAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGC 150669
Query 10175 TTCCTCGACGATGCTCTTTACCA------CGTCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228
|| | | |||| || || | ||| ||| | | | |||| | | ||
Sbjct 150670 CTCGACAATGATGTCCTGAACGATCTTGGGGTC--GGGGC-GGTGGTTC---ATGTGGGA 150723
Query 10229 ATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGA 10288
| || || | || | |||||| |||||||| || ||||| |||||||||
Sbjct 150724 GAAGAGCAGGCAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGA 150783
Query 10289 CAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCC 10348
||| ||||||||||| | || || || ||||||||| |||| | ||| || ||
Sbjct 150784 GAAAGTGAGACCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCC 150843
Query 10349 GGAGAACAGAAGACCCTCCAC 10369
|||||| | | |||||| ||
Sbjct 150844 GGAGAAGAAGATACCCTCAAC 150864
Score = 89.7 bits (98), Expect = 9e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 10623 AGGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAG 10682
|||||||| | || || || ||| | | || |||||| | || | ||| |||||||
Sbjct 151174 AGGTTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCCAGAACGTGGGAGATGAAG 151233
Query 10683 TGGCGCTCATCATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACC 10742
| ||||||||||||||||| | ||||||| | ||||| | ||| | | |
Sbjct 151234 TAACGCTCATCATCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATC 151293
Query 10743 TCCTCCACGGTCCAGAAAGTGGCAACGGCCTTCTTGTACATCTG 10786
||||| |||||||||||| || |||||||||||||||| ||
Sbjct 151294 TCCTCGGCGGTCCAGAAAGAAGCTTCGGCCTTCTTGTACATTTG 151337
>seq1641
Length=3225
Score = 147 bits (162), Expect = 4e-30
Identities = 159/208 (76%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 68255 CAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAA 68314
|| ||| || |||||||| || |||||||||||||| || || || | ||||| || |
Sbjct 3225 CAGGTGCAGTGTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAG 3166
Query 68315 CTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAAT 68374
|||||| || ||||| || || | || |||||||| ||||| || |||||||| || ||
Sbjct 3165 CTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGAT 3106
Query 68375 CTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTACTTCCAAGGTGATGGTTTTTC 68433
|| | ||| || ||||| || || |||| | || || || | ||||||||| || |
Sbjct 3105 TTTGGACTTTACATTGTCGATAGTATC-GCTGGACTCAACCTCAAGGGTGATGGTCTTGC 3047
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || |||||||||||||| ||||||||
Sbjct 3046 CAGTAAGGGTCTTGACGAAGATCTGCAT 3019
>seq801
Length=61771
Score = 120 bits (132), Expect = 6e-22
Identities = 136/180 (76%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333
|| |||||||| || ||| || || | ||||| || | |||||| |||||||| ||
Sbjct 22502 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 22443
Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393
|| | || ||||| || ||||| || ||||| || || ||||| | |||||| |||
Sbjct 22442 AGGCGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTGGTCTTGACATTGTCG 22383
Query 68394 ATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452
|||||||| ||| || || || || | ||| ||||| || ||||| ||||||||||||||
Sbjct 22382 ATGGTGTC-GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 22324
>seq248
Length=5266
Score = 91.5 bits (100), Expect = 3e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 225779 TCGTGGTCCACGTACACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCA 225838
||||| || ||||| || ||| || || | | |||||| ||||| ||||| |
Sbjct 1430 TCGTGCTCGACGTAAACGGTCTTGACCTCATCCTTCTTGGGGAAACCCTCAAGCTGCTCG 1489
Query 225839 TTTGCAATCGCACGGAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAA 225898
|| || ||||| | ||||| |||| || | |||||||| |||| ||| ||||||
Sbjct 1490 TTGTTGATGGCACGCATGAGGGTGGTCTTTCCGGAACCGTTGGGGCCGAGGAGACCGTAA 1549
Query 225899 TGATTCCCGCGCTTGATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCA 225958
| | || ||||||| | | | || |||||| || |||||| |||| || |||
Sbjct 1550 CGCTGACCACGCTTGAGACGCAAGTGAGTCTGGTTCAGCAGAATCTTGGCACCGTAAGCA 1609
Query 225959 AGGGAGAACTCGCAATCGCACAGGTCCTCACCCTCCTC 225996
|||||||| ||| | ||| ||||| |||| |||||
Sbjct 1610 AGGGAGAATGTGCAGTTGCAAAGGTCAACACCTTCCTC 1647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921603322416320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |