Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09-
20] 1,656 sequences; 28,072,829 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq433 154 3e-32
seq1641 113 1e-19
seq801 107 5e-18
>seq433
Length=43892
Score = 154 bits (170), Expect = 3e-32
Identities = 173/230 (75%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| ||||| |||| ||| ||| || ||||| ||||| || | |
Sbjct 1895 CCACCACGTAGACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAG 1836
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||| | ||| || ||||||||||| || ||||| || || |||
Sbjct 1835 AGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGG---TCGGGG 1779
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| || || ||||||||||| | || || || || |||| |||||| || ||
Sbjct 1778 GGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCA 1719
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| || || || ||||||||||| ||||||||
Sbjct 1718 ACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 1669
Score = 145 bits (160), Expect = 2e-29
Identities = 165/220 (75%), Gaps = 6/220 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | ||| ||||| |||| ||| ||| || ||||| ||||| || | |
Sbjct 1667 CCACCACGTAGACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAG 1608
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||| | ||| || ||||||||||| || ||||| || || |||
Sbjct 1607 AGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGG---TCCGGG 1551
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| || || ||||||||||| | || || || || |||| |||||| || ||
Sbjct 1550 GGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCA 1491
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463
|| || || ||||| ||||| |||||||| ||||| ||||
Sbjct 1490 ACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTTACGA 1451
Score = 120 bits (132), Expect = 7e-22
Identities = 151/206 (73%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || ||||| |||| ||| ||| || ||||| |||||||| |
Sbjct 1385 CCACCACGGAGGCGGAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAGTCCGAC 1326
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| || ||||| | ||| || ||||||||||| || ||||| || || |||
Sbjct 1325 AAGGTGCGACCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGG---TCGGGG 1269
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| || || ||||||||||| | || || || || |||| |||||| || ||
Sbjct 1268 GGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCA 1209
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGT 288449
|| || || ||||| ||||| || ||
Sbjct 1208 ACCTCAAGGGTGATGGTCTTGCCAGT 1183
>seq1641
Length=3225
Score = 113 bits (124), Expect = 1e-19
Identities = 142/194 (73%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| ||||| || | || || || || || || | || || || ||||||
Sbjct 3209 TCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGCTGCTTACCAGCGAAG 3150
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399
|| || ||||| || || ||| ||||| || || ||||||||||| | || ||
Sbjct 3149 ATAAGGCGCTGCTGG---TCGGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACA 3093
Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459
|| || |||| |||||| || || || || || ||||| ||||| || || || ||||||
Sbjct 3092 TTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTG 3033
Query 288460 ACGAATATCTGCAT 288473
||||| ||||||||
Sbjct 3032 ACGAAGATCTGCAT 3019
>seq801
Length=61771
Score = 107 bits (118), Expect = 5e-18
Identities = 131/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || |||||| || ||||| || || || | || || || |||||||||
Sbjct 22502 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 22443
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| ||||| || | || || || || ||||||||||| || | || || || ||
Sbjct 22442 AGGCGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTGGTCTTGACATTGTCG 22383
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| | |||||||| || || ||||| || || ||||| || ||||| |||||||||||
Sbjct 22382 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 22324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179629370682768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |