Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq433 154 3e-32 seq1641 113 1e-19 seq801 107 5e-18 >seq433 Length=43892 Score = 154 bits (170), Expect = 3e-32 Identities = 173/230 (75%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| |||| ||| ||| || ||||| ||||| || | | Sbjct 1895 CCACCACGTAGACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAG 1836 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| || ||||||||||| || ||||| || || ||| Sbjct 1835 AGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGG---TCGGGG 1779 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || ||||||||||| | || || || || |||| |||||| || || Sbjct 1778 GGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCA 1719 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || || || ||||||||||| |||||||| Sbjct 1718 ACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 1669 Score = 145 bits (160), Expect = 2e-29 Identities = 165/220 (75%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| |||| ||| ||| || ||||| ||||| || | | Sbjct 1667 CCACCACGTAGACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAG 1608 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | ||| || ||||||||||| || ||||| || || ||| Sbjct 1607 AGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGG---TCCGGG 1551 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || ||||||||||| | || || || || |||| |||||| || || Sbjct 1550 GGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCA 1491 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGA 288463 || || || ||||| ||||| |||||||| ||||| |||| Sbjct 1490 ACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTTACGA 1451 Score = 120 bits (132), Expect = 7e-22 Identities = 151/206 (73%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || ||||| |||| ||| ||| || ||||| |||||||| | Sbjct 1385 CCACCACGGAGGCGGAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAGTCCGAC 1326 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| || ||||| | ||| || ||||||||||| || ||||| || || ||| Sbjct 1325 AAGGTGCGACCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGG---TCGGGG 1269 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || ||||||||||| | || || || || |||| |||||| || || Sbjct 1268 GGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCA 1209 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGT 288449 || || || ||||| ||||| || || Sbjct 1208 ACCTCAAGGGTGATGGTCTTGCCAGT 1183 >seq1641 Length=3225 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| ||||| || | || || || || || || | || || || |||||| Sbjct 3209 TCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGCTGCTTACCAGCGAAG 3150 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || ||||| || || ||| ||||| || || ||||||||||| | || || Sbjct 3149 ATAAGGCGCTGCTGG---TCGGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACA 3093 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || |||| |||||| || || || || || ||||| ||||| || || || |||||| Sbjct 3092 TTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTG 3033 Query 288460 ACGAATATCTGCAT 288473 ||||| |||||||| Sbjct 3032 ACGAAGATCTGCAT 3019 >seq801 Length=61771 Score = 107 bits (118), Expect = 5e-18 Identities = 131/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || || || ||||||||| Sbjct 22502 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 22443 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || ||||| || | || || || || ||||||||||| || | || || || || Sbjct 22442 AGGCGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTGGTCTTGACATTGTCG 22383 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 22382 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 22324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179629370682768