Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1641 114 1e-20 seq433 113 5e-20 seq801 87.8 2e-12 >seq1641 Length=3225 Score = 114 bits (126), Expect = 1e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065 |||| |||| |||||| || || || ||||| | || || || | || || |||||| Sbjct 3221 TGCAGTGTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGCTGC 3162 Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125 ||||||||||| || || ||||||||||||| || | | |||||||||| |||||| Sbjct 3161 TTACCAGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTG 3102 Query 42126 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 42185 || | | | | || ||||| || || || || | |||||||| ||||| || Sbjct 3101 GACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTA 3042 Query 42186 AGCGTCTTTACAAAGATTTGCAT 42208 || ||||| || ||||| ||||| Sbjct 3041 AGGGTCTTGACGAAGATCTGCAT 3019 >seq433 Length=43892 Score = 113 bits (124), Expect = 5e-20 Identities = 167/233 (72%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 41980 GACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAG 42039 |||| || | | ||||| ||||||||||| ||||||||||| || || ||||| || | Sbjct 2125 GACCACCACGCAGACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCG 2066 Query 42040 CCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTG 42099 ||||| || | || || ||||||||||||||||| || || ||||||||||| | | Sbjct 2065 AAAGAGTACGTCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGG 2006 Query 42100 GCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGAT 42155 | | | |||||| | | ||| | || ||| ||| | | | ||||| ||| Sbjct 2005 GAATTCCCTCCTTAT-CTTGAATCTTGCTTTTCACGTTGTCGATAGTGTCTGAACTC--- 1950 Query 42156 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || | ||||| || || || || | ||||| |||||||||||||| Sbjct 1949 TCAACCTCCAGTGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1897 Score = 96.9 bits (106), Expect = 4e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || || ||||| | || || || | || || || ||||| || ||||| Sbjct 1859 TCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAG 1800 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||||||||||| || | | |||||||||| |||||| || | | Sbjct 1799 ATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTG 1740 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | || ||||| || || || || | |||||||| ||||| || || ||||| || Sbjct 1739 TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACG 1680 Query 42198 AAGATTTGCAT 42208 ||||| ||||| Sbjct 1679 AAGATCTGCAT 1669 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || || ||||| | || || || | || || || ||||| || ||||| Sbjct 1631 TCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAG 1572 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||||||||| | || | | |||||||||| |||||| || | | Sbjct 1571 ATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTG 1512 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | || ||||| || || || || | |||||||| ||||| || || |||||||| Sbjct 1511 TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTTAC 1453 >seq801 Length=61771 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 |||| || || ||||| || ||| || || | || || |||||||| || ||||| | Sbjct 22504 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 22445 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | || ||||||||||| | || | | |||||| ||| ||| || |||| | Sbjct 22444 TCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTGGTCTTGACATTGT 22385 Query 42139 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 42198 | | ||||||||||| || ||||||| || ||||| || ||||| || ||||| || | Sbjct 22384 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 22325 Query 42199 A 42199 | Sbjct 22324 A 22324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543201555495040