Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq433 136 4e-27 seq1641 98.7 1e-15 >seq433 Length=43892 Score = 136 bits (150), Expect = 4e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || ||||| || || ||||| ||||||| || |||||| | || Sbjct 1653 AAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATC 1594 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||| |||||||| || | ||||| ||||||||||| || |||||||| || || || Sbjct 1593 TTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 1534 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || ||||| ||||||| || | ||||| | || || || || | || | ||| Sbjct 1533 CTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGT 1474 Query 64411 CTTGCCGGTCAAAGTTTTTACGA 64433 ||||||||||| || ||||||| Sbjct 1473 CTTGCCGGTCAGGGTCTTTACGA 1451 Score = 136 bits (150), Expect = 4e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || |||| || ||||| || || ||||| ||||||| || |||||| | || Sbjct 1881 AAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATC 1822 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||| |||||||| || | ||||| |||||||||||||| |||||||| || || || Sbjct 1821 TTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTC 1762 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || ||||| ||||||| || | ||||| | || || || || | || | ||| Sbjct 1761 CTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGT 1702 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | || || ||||| || ||||| Sbjct 1701 CTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 1669 Score = 109 bits (120), Expect = 5e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || || |||| || ||||| || || ||||| || || | | |||||| | ||| Sbjct 1370 AGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAGTCCGACAAGGTGCGACCATCT 1311 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 ||||| |||||||| || | ||||| |||||||||||||| |||||||| || || || Sbjct 1310 TCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCC 1251 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||||||| || | ||||| | || || || || | || | |||| Sbjct 1250 TGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 1191 Query 64412 TTGCCGGT 64419 ||||| || Sbjct 1190 TTGCCAGT 1183 >seq1641 Length=3225 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || ||||| ||||| | | ||| || | || || |||||||| || Sbjct 3215 GTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGCTGCTTACCA 3156 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || |||||||||||||| |||||||| || || || || ||||| |||| Sbjct 3155 GCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTT 3096 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | ||||| | || || || || | || | ||||||||| || | || Sbjct 3095 ACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTC 3036 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 3035 TTGACGAAGATCTGCAT 3019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499634457352640