Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq833 154 2e-32 seq1127 132 6e-26 >seq833 Length=32517 Score = 154 bits (170), Expect = 2e-32 Identities = 311/459 (68%), Gaps = 2/459 (0%) Strand=Plus/Minus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 || ||||||| || ||||| || || |||| |||||| | || ||||||| | Sbjct 25739 GGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACTGTACTCGACG 25680 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || || || || | || || || ||| || |||| |||||| || || ||| || Sbjct 25679 ATCTCGGTGCAAAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTG 25620 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || || |||||||| |||||||| | || | || ||||| || |||| || |||||| Sbjct 25619 TTGCAAGCATCCTTATAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATG 25560 Query 116605 GCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 116663 || | ||| | | || | | || | | || | | | || ||||||| ||||||||| Sbjct 25559 GCATACCAGAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCCTGCTCGTACTT 25501 Query 116664 TGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGG 116723 ||| || || || ||||| ||||| | | || | || || || |||| | || Sbjct 25500 CACGTAAAGAGCGTCGAACTCATCACCGTAAACATCAGCCAGGCCGGGGGCCTCGTTGGG 25441 Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783 |||||||| | ||| | ||| ||||||| |||||||||||||| || || |||| Sbjct 25440 GCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGAGTCCA 25381 Query 116784 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843 | || ||||||| || || |||| | || || | || || || |||| || Sbjct 25380 CAAAGCGTAGAAGAGGTCACGGGCGCGAACCTCCTCCTTACCGTGGTTCTTGCGCAGATC 25321 Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTA 116882 | || || | || ||| |||||||| || |||||||| Sbjct 25320 GAGGAACTCGAAGACATCGGCGTGCCATGGCTCCAGGTA 25282 >seq1127 Length=175000 Score = 132 bits (146), Expect = 6e-26 Identities = 299/446 (67%), Gaps = 14/446 (3%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| ||||| ||||||||||||||||| ||||| ||| | ||| ||| |||||| Sbjct 150448 GTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCAT 150507 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGC-ACCCCAATCTGTTTGAG 127344 || || || ||||| | | ||| | |||||| | | | | | || Sbjct 150508 GAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC------AG 150561 Query 127345 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 127404 || || || | |||| ||||||||||||| ||||| || |||||||| || | || Sbjct 150562 CAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCATGCCAAGAAG 150621 Query 127405 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGAT 127464 || || || ||||| | |||| ||| ||| ||| | || || || | ||| Sbjct 150622 ACCGCAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCGACAATGAT 150681 Query 127465 GGCGTGAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTT-GAAGAGTTCCACAGCAA 127523 | | |||| | | | || | | | | | || |||||| ||| | Sbjct 150682 GTCCTGAACGATCTTGGGGTCGGGGCGGTGGT-TCATGTGGGAGAAGAGCAGGCAAGCGA 150740 Query 127524 ACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 127583 | || |||||||||||||||||| |||||||| || || ||||| ||||| |||| Sbjct 150741 AGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCGGGCA 150800 Query 127584 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 127643 | | || |||||||||| |||||| || | |||||||| ||||||||||| |||| Sbjct 150801 TCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCCT 150860 Query 127644 CCACACACGCGAACGCAAATAGACGC 127669 | ||| ||||| |||| |||||| Sbjct 150861 CAACAGCGGCGAAGGCAACCAGACGC 150886 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613494500400960