Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09-
20] 1,656 sequences; 28,072,829 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq801 129 7e-25
seq433 107 2e-18
seq1641 104 3e-17
seq1654 89.7 6e-13
>seq801
Length=61771
Score = 129 bits (142), Expect = 7e-25
Identities = 137/181 (76%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||| || ||||| | || |||||||||||||||||||| |
Sbjct 22504 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 22445
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||| | || | | |||||| ||| |||||| |||||| |
Sbjct 22444 TCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTGGTCTTGACATTGT 22385
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | ||||||||||| || ||||| | || ||||| || |||||||| || || || |
Sbjct 22384 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 22325
Query 46584 A 46584
|
Sbjct 22324 A 22324
>seq433
Length=43892
Score = 107 bits (118), Expect = 2e-18
Identities = 158/220 (72%), Gaps = 8/220 (4%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| ||||| ||||| || |||||||| ||||| |||||||| || ||||| || |
Sbjct 2112 ACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCC 2053
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| || |||||||| || ||||| || | ||||||||||| | || | | ||||||
Sbjct 2052 ATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCCCTCCTT 1993
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCG 46553
|| ||||| | || | ||| | | | ||||| ||| || || |||| |
Sbjct 1992 ATCTTGAATCTTGCTTTTCA-CGTTGTCGATAGTGTCTGAACTC---TCAACCTCCAGTG 1937
Query 46554 TGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||| || || || |||| || || ||||||||||||||
Sbjct 1936 TGATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1897
Score = 102 bits (112), Expect = 9e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| || || || || || ||||| | || || || |||||||| |||||
Sbjct 1859 TCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAG 1800
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | |||||||||||||| || | | |||||||||| ||| || ||| | |
Sbjct 1799 ATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTG 1740
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | || ||||| || || || || | |||||||| ||||| || || || || ||
Sbjct 1739 TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACG 1680
Query 46583 AAGATTTGCAT 46593
||||| |||||
Sbjct 1679 AAGATCTGCAT 1669
Score = 89.7 bits (98), Expect = 6e-13
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| || || || || || ||||| | || || || |||||||| |||||
Sbjct 1631 TCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAG 1572
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | |||||||||||| | || | | |||||||||| ||| || ||| | |
Sbjct 1571 ATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTG 1512
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | || ||||| || || || || | |||||||| ||||| ||||| || || ||
Sbjct 1511 TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTTAC 1453
Score = 86.0 bits (94), Expect = 7e-12
Identities = 119/167 (71%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| || ||||| || | ||||| | || || || |||||||| |||||
Sbjct 1349 TCCTTCTGGATGTTATAGTCCGACAAGGTGCGACCATCTTCAAGTTGCTTGCCTGCGAAG 1290
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | |||||||||||||| || | | |||||||||| ||| || ||| | |
Sbjct 1289 ATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTG 1230
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| | || ||||| || || || || | |||||||| ||||| ||
Sbjct 1229 TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 1183
>seq1641
Length=3225
Score = 104 bits (114), Expect = 3e-17
Identities = 147/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 46387 CAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAG 46446
||| |||| ||| |||||| ||||| || || || || || || || | || || ||
Sbjct 3225 CAGGTGCAGTGTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAG 3166
Query 46447 CTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGAT 46506
|||||| || ||||| || | |||||||||||||| || | | |||||||||| |||
Sbjct 3165 CTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGAT 3106
Query 46507 CTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCC 46566
|| ||| | | | | || ||||| || || || || | |||||||| |||||
Sbjct 3105 TTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCC 3046
Query 46567 CGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || ||||| |||||
Sbjct 3045 AGTAAGGGTCTTGACGAAGATCTGCAT 3019
Score = 89.7 bits (98), Expect = 6e-13
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || || |||||||| | || ||||||||||| || |||||
Sbjct 2982 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAA 2923
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|||| |||||||||||| | || | | |||||||||
Sbjct 2922 GATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 2884
>seq1654
Length=1850
Score = 89.7 bits (98), Expect = 6e-13
Identities = 79/99 (80%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||| || || |||||||| | || ||||||||||| || |||||
Sbjct 1575 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAA 1634
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500
|||| |||||||||||| | || | | |||||||||
Sbjct 1635 GATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 1673
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565226699565120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |