Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09-
20] 1,656 sequences; 28,072,829 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1641 102 5e-17
seq433 100 2e-16
>seq1641
Length=3225
Score = 102 bits (112), Expect = 5e-17
Identities = 151/212 (71%), Gaps = 8/212 (4%)
Strand=Plus/Minus
Query 34775 CAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAG 34834
|| ||| | |||| || ||||| |||||||| ||||||||| | || |||| |||||
Sbjct 3225 CAGGTGCAGTGTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAG 3166
Query 34835 CTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAAT 34894
||| || || || || || || || |||||||| | || | ||||||||||| ||
Sbjct 3165 CTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGAT 3106
Query 34895 CTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTT 34950
|| || || || | ||||| || | || |||||| || | ||| ||||| |
Sbjct 3105 TTTGGACTTTAC--AT--TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCT 3050
Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| || || || ||||| || ||||||||||||
Sbjct 3049 TGCCAGTAAGGGTCTTGACGAAGATCTGCATA 3018
>seq433
Length=43892
Score = 100 bits (110), Expect = 2e-16
Identities = 148/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
||||| || | ||||| || ||||| ||||| ||||||||||| | ||| |||| |||
Sbjct 2105 ACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCATCCTCC 2046
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
||||| || || || || || || || |||||||| | || | |||||||| || |
Sbjct 2045 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCCCTCCTTATCTTGA 1986
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| ||| ||| | || | || |||||| || | || || || |||
Sbjct 1985 ATCTTGCTTTTCACGTTGTCGATAGTGTCTGAACTCTCAACCTCCAGTGTGATAGTCTTT 1926
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| || | ||||| |||||||| ||||||
Sbjct 1925 CCAGTCAAGGTCTTGACAAAGATTTGCATA 1896
Score = 91.5 bits (100), Expect = 1e-13
Identities = 147/209 (70%), Gaps = 8/209 (4%)
Strand=Plus/Minus
Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837
||||| |||| ||| ||||| |||||||| || || ||| | || |||| || || ||
Sbjct 1872 GTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTG 1813
Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897
|| || || || || || || |||||||| | || | ||||||||||| || ||
Sbjct 1812 CTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTT 1753
Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953
|| || || | ||||| || | || |||||| || | ||| ||||| || |
Sbjct 1752 GGACTTTAC--AT--TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGC 1697
Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| || || ||||| || ||||||||||||
Sbjct 1696 CAGTAAGGGTCTTGACGAAGATCTGCATA 1668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324627048082368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |