Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1641 102 5e-17 seq433 100 2e-16 >seq1641 Length=3225 Score = 102 bits (112), Expect = 5e-17 Identities = 151/212 (71%), Gaps = 8/212 (4%) Strand=Plus/Minus Query 34775 CAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAG 34834 || ||| | |||| || ||||| |||||||| ||||||||| | || |||| ||||| Sbjct 3225 CAGGTGCAGTGTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAG 3166 Query 34835 CTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAAT 34894 ||| || || || || || || || |||||||| | || | ||||||||||| || Sbjct 3165 CTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGAT 3106 Query 34895 CTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTT 34950 || || || || | ||||| || | || |||||| || | ||| ||||| | Sbjct 3105 TTTGGACTTTAC--AT--TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCT 3050 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || || ||||| || |||||||||||| Sbjct 3049 TGCCAGTAAGGGTCTTGACGAAGATCTGCATA 3018 >seq433 Length=43892 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 ||||| || | ||||| || ||||| ||||| ||||||||||| | ||| |||| ||| Sbjct 2105 ACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCATCCTCC 2046 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || || |||||||| | || | |||||||| || | Sbjct 2045 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCCCTCCTTATCTTGA 1986 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||| ||| | || | || |||||| || | || || || ||| Sbjct 1985 ATCTTGCTTTTCACGTTGTCGATAGTGTCTGAACTCTCAACCTCCAGTGTGATAGTCTTT 1926 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || | ||||| |||||||| |||||| Sbjct 1925 CCAGTCAAGGTCTTGACAAAGATTTGCATA 1896 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/209 (70%), Gaps = 8/209 (4%) Strand=Plus/Minus Query 34778 GTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTG 34837 ||||| |||| ||| ||||| |||||||| || || ||| | || |||| || || || Sbjct 1872 GTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTG 1813 Query 34838 TTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTT 34897 || || || || || || || |||||||| | || | ||||||||||| || || Sbjct 1812 CTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTT 1753 Query 34898 CTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 || || || | ||||| || | || |||||| || | ||| ||||| || | Sbjct 1752 GGACTTTAC--AT--TGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGC 1697 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || ||||| || |||||||||||| Sbjct 1696 CAGTAAGGGTCTTGACGAAGATCTGCATA 1668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324627048082368