Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09-
20] 1,656 sequences; 28,072,829 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq1127 134 2e-25
seq833 127 3e-23
seq857 111 2e-18
seq250 102 1e-15
>seq1127
Length=175000
Score = 134 bits (148), Expect = 2e-25
Identities = 182/252 (72%), Gaps = 4/252 (2%)
Strand=Plus/Plus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || ||| |||||| |||||||||||||| | |
Sbjct 150432 TGACACCGGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCA 150491
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| ||||| ||||||| | ||| ||||||| | ||||| ||||| | ||||
Sbjct 150492 GGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGA 150551
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | | ||||||||||| |||||||| |||||||||| |||||| || || |||||
Sbjct 150552 GGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCA 150611
Query 794071 TGCC--GATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGC 794128
|||| || || ||| ||| || | || | | ||||| | |||||| |||||||
Sbjct 150612 TGCCAAGAAGACCGC--AGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGC 150669
Query 794129 CTCGATGATGAT 794140
||||| |||||
Sbjct 150670 CTCGACAATGAT 150681
Score = 95.1 bits (104), Expect = 2e-13
Identities = 96/122 (79%), Gaps = 6/122 (5%)
Strand=Plus/Plus
Query 794548 GTGTCGATGGCGCGAAAGAGGT-GGTCC--TTCTCGACCGGGTCCTTGACGTAGGTGTCG 794604
||||| ||||| |||||||| ||| | | || | || ||||||| ||||||||||
Sbjct 151012 GTGTCAATGGCATCAAAGAGGTAGGTGCGCTGCTTG---GGCTCCTTGATGTAGGTGTCG 151068
Query 794605 ATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAG 794664
||||| | ||||||||||| ||||||||||| || || |||||||||||| || |||
Sbjct 151069 ATGAGCAAAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAG 151128
Query 794665 CA 794666
||
Sbjct 151129 CA 151130
>seq833
Length=32517
Score = 127 bits (140), Expect = 3e-23
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 2071800 CAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCG 2071859
||||||||| |||||| ||||| ||||| | |||||| ||| | | | || ||
Sbjct 25461 CAGGCCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTT 25402
Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919
||| || || ||| ||||||| |||| ||||| || || || || |||||||||
Sbjct 25401 CATGAAGAGATCGGGAGTCCACAAAGCGTAGAAGAGGTCACGGGCGCGAACCTCCTCCTT 25342
Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979
||||||||||| ||| ||||| | |||| || ||||||||||| |||||||||||
Sbjct 25341 ACCGTGGTTCTTGCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCATGGCTCCAGGTA 25282
Query 2071980 GCAGGCAAAGGCGCCCTTGCGCTTG 2072004
| |||||||| || |||||||
Sbjct 25281 GATAGCAAAGGCACCAGGGCGCTTG 25257
>seq857
Length=47708
Score = 111 bits (122), Expect = 2e-18
Identities = 91/111 (82%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| ||||||||| | || |||||| ||||||| || | || |||||||| || ||||||
Sbjct 37939 GCTGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACAGTCGCCAAC 37880
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757
| |||||||||||||| || ||||| ||||| |||||||| |||||| ||
Sbjct 37879 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGTAAGACCTTCAACATCCAG 37829
>seq250
Length=14695
Score = 102 bits (112), Expect = 1e-15
Identities = 122/163 (75%), Gaps = 2/163 (1%)
Strand=Plus/Plus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||| || |||||||| ||||| |||||||| ||| ||||||| || ||| | |
Sbjct 9376 GTACTTGGTCACAGCCTTGGTGCCCTCAGAGACGGCATGCTTGGCCAGCTCACCGGGGAG 9435
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590
||| || ||||| | ||||||||||| |||| | ||| ||| |||||| || |
Sbjct 9436 GATGAGACGCACAGAAGTCTGGATCTCCCGGGAGGAGATAGTGGACTTCTTGTT-GTAAG 9494
Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632
| ||||| | ||||||||| ||| ||| |||| |||||
Sbjct 9495 CAGCCAGCTTGGAGGCCTCGGTAGCGACGCGCTCGAAGATGTC 9537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916070243726984
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |