Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09-
20] 1,656 sequences; 28,072,829 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq433 104 2e-17
seq1641 87.8 1e-12
>seq433
Length=43892
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616
|| || || | || ||||||||||||||| || ||| || || || ||||| || |||
Sbjct 2126 TGACCACCACGCAGACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCC 2067
Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676
| || || || ||| || || || || ||||| | || | | ||||| || ||
Sbjct 2066 GAAAGAGTACGTCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGG 2007
Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736
||||| ||||| || ||||| | || ||| || | || | |||||| ||| ||
Sbjct 2006 GGAATTCCCTCCTTATCTTGAATCTTGCTTTTCACGTTGTCGATAGTGTCTGAACTCTCA 1947
Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || ||||| || ||||| ||||| || ||||| || |||||
Sbjct 1946 ACCTCCAGTGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1897
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||||| |||||||| || || ||||||||||| | | ||||||
Sbjct 1884 ACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCC 1825
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || ||||| ||||| || | || | | ||||| || || ||||| ||||| ||
Sbjct 1824 ATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTT 1765
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | ||| || ||| | || | ||| || || || ||||| || ||
Sbjct 1764 GTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGAT 1705
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||||||| | ||| || || || ||||||||
Sbjct 1704 GGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 1669
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||||| |||||||| || || ||||||||||| | | ||||||
Sbjct 1656 ACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCC 1597
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || ||||| ||||| || | || | | ||||| ||||| ||||| ||||| ||
Sbjct 1596 ATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTT 1537
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | ||| || ||| | || | ||| || || || ||||| || ||
Sbjct 1536 GTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGAT 1477
Query 29751 AGTTTTGCCAGTTAAGGTTTTAAC 29774
|| ||||| || | ||| || ||
Sbjct 1476 GGTCTTGCCGGTCAGGGTCTTTAC 1453
>seq1641
Length=3225
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| || ||||| || || || ||||||||||||| || ||| || ||| || || ||
Sbjct 3221 TGCAGTGTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGCTGC 3162
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| ||||| | || | | ||||| || || ||||| ||||| ||||| || | |||
Sbjct 3161 TTACCAGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTG 3102
Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763
|| ||| | || | ||| || || || ||||| || || || ||||||||
Sbjct 3101 GACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTA 3042
Query 29764 AAGGTTTTAACAAATATCTGCAT 29786
| ||| || || || ||||||||
Sbjct 3041 AGGGTCTTGACGAAGATCTGCAT 3019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385211425313496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |