Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq433 104 2e-17 seq1641 87.8 1e-12 >seq433 Length=43892 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616 || || || | || ||||||||||||||| || ||| || || || ||||| || ||| Sbjct 2126 TGACCACCACGCAGACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCC 2067 Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676 | || || || ||| || || || || ||||| | || | | ||||| || || Sbjct 2066 GAAAGAGTACGTCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGG 2007 Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736 ||||| ||||| || ||||| | || ||| || | || | |||||| ||| || Sbjct 2006 GGAATTCCCTCCTTATCTTGAATCTTGCTTTTCACGTTGTCGATAGTGTCTGAACTCTCA 1947 Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || ||||| || ||||| ||||| || ||||| || ||||| Sbjct 1946 ACCTCCAGTGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1897 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| |||||||| || || ||||||||||| | | |||||| Sbjct 1884 ACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCC 1825 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| ||||| || | || | | ||||| || || ||||| ||||| || Sbjct 1824 ATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTT 1765 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | ||| || ||| | || | ||| || || || ||||| || || Sbjct 1764 GTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGAT 1705 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| | ||| || || || |||||||| Sbjct 1704 GGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 1669 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| |||||||| || || ||||||||||| | | |||||| Sbjct 1656 ACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCC 1597 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || ||||| ||||| || | || | | ||||| ||||| ||||| ||||| || Sbjct 1596 ATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTT 1537 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | ||| || ||| | || | ||| || || || ||||| || || Sbjct 1536 GTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGAT 1477 Query 29751 AGTTTTGCCAGTTAAGGTTTTAAC 29774 || ||||| || | ||| || || Sbjct 1476 GGTCTTGCCGGTCAGGGTCTTTAC 1453 >seq1641 Length=3225 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 || || ||||| || || || ||||||||||||| || ||| || ||| || || || Sbjct 3221 TGCAGTGTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGCTGC 3162 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 || ||||| | || | | ||||| || || ||||| ||||| ||||| || | ||| Sbjct 3161 TTACCAGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTG 3102 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 || ||| | || | ||| || || || ||||| || || || |||||||| Sbjct 3101 GACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTA 3042 Query 29764 AAGGTTTTAACAAATATCTGCAT 29786 | ||| || || || |||||||| Sbjct 3041 AGGGTCTTGACGAAGATCTGCAT 3019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385211425313496