Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1127 152 7e-31 seq833 105 1e-16 seq1110 91.5 2e-12 >seq1127 Length=175000 Score = 152 bits (168), Expect = 7e-31 Identities = 244/342 (71%), Gaps = 19/342 (6%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||| || || || ||||||||||||||| | || | Sbjct 151344 GATCTGGCAAATGTAC-AAGAAGGCCGAAGCTTCTTTCTGGACCGCCGAGGAGATTGATC 151286 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| ||| ||| || ||||| | ||| Sbjct 151285 TCTCCAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGATGATGAGCGTTACTTC 151230 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| ||||| || ||||| || ||||||| ||| || || || ||||||||| | Sbjct 151229 ATCTCCCACGTTCTGGCCTTCTT-CGCCGCCTCCGACGGTATTGTCAACGAGAACCTTGT 151171 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 || || || | |||||| || | || ||||| |||| || ||||| |||||||| Sbjct 151170 CGAGCGTTTCAGTTCAGAGGTTCAGATTCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 151111 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || |||||||| | || |||||||||||| ||||||| Sbjct 151110 CATGATGGAGAACATCCACTCCGAGACCTACTCTTTGCTCATCGACACCTACATCAAGGA 151051 Query 1456068 CCCGGTCGAGAA--GGACC-ACCTCTTTCGCGCCATCGACAC 1456106 || | || | | ||| |||||||| ||||| ||||| Sbjct 151050 GCC---CAAGCAGCGCACCTACCTCTTTGATGCCATTGACAC 151012 Score = 131 bits (144), Expect = 2e-24 Identities = 190/261 (73%), Gaps = 8/261 (3%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||| ||||||||||||| |||||| | ||||| | | || | || || ||| Sbjct 150681 ATCATTGTCGAGGCCGTCGGCATCGAGCAGGAGTTCCTGACTGACGCTCTTCCCT--GCG 150624 Query 1456583 CTCATC--GGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640 || || ||||||||| ||| ||| |||||| |||||||||| || ||||| ||||| Sbjct 150623 GTCTTCTTGGCATGAACTCCAA-GCTGATGTGCGAGTACATTGAGTTC-GTCGCTGACCG 150566 Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGA 1456700 |||||| | ||| |||||| | ||||| ||||| | ||||||| ||| | | Sbjct 150565 CCTGCTGGTGGCCCTCGGCAACA-AGAAGTACTACAACGCTACCAACCCCTTCGACTTCA 150507 Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACG 1456759 |||||| ||||| || | |||||||||||||| |||||| || || || || ||| Sbjct 150506 TGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACC 150447 Query 1456760 CCAAGGCCGGCGTCACCGCCA 1456780 |||||||| |||| |||| Sbjct 150446 AGAAGGCCGGTGTCATGGCCA 150426 >seq833 Length=32517 Score = 105 bits (116), Expect = 1e-16 Identities = 291/442 (66%), Gaps = 16/442 (4%) Strand=Plus/Plus Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855 ||||||| || |||||||| ||||||||| || ||||||||||| || || | | Sbjct 25257 CAAGCGCCCTGGTGCCTTTGCTATCTACCTGGAGCCATGGCACGCCGATGTCTTCGAGTT 25316 Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915 || || || ||||||||||| |||| |||| || ||| || || ||||| Sbjct 25317 CCTCGATCTGCGCAAGAACCACGGTAAGGA----GGAGGTTCG--CGCCCGTGACCTCTT 25370 Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975 |||| ||||||| ||| || || ||| || | | | || | | |||||| | Sbjct 25371 CTACGCTTTGTGGACTCCCGATCTCTTCATGAAGCGTGTTGAGGCCAACGGTGACTGGAC 25430 Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035 ||||| ||||| |||||| ||||||||| || || || | | || ||||| Sbjct 25431 CCTCTTCTGCCCCAACGAGGCCCCCGGCCTGGCTGATGTTTACGGTGATGAGTTCGACGC 25490 Query 262036 CCTCTA--TGAGNNNNNNNNNNNNNNNNNNNNNNCGCG-GACCGTCGTGCCCGCACGACA 262092 || || ||| ||| |||| || | | || || | Sbjct 25491 TCTTTACGTGAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACCATCAAGGCT-CA-GA-A 25547 Query 262093 GATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAA 262152 | |||||| |||||| ||| |||||| | ||||| || | |||| |||| |||| || Sbjct 25548 GCTCTGGTATGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATGCTCTATAA 25607 Query 262153 GGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAAC 262210 ||| || |||| || || |||||| |||||||||| || | || ||| ||||| Sbjct 25608 GGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCG-CAGCT-CCAAC 25665 Query 262211 CTGTGCACCGAGATCGTCCAGT 262232 || ||||||||||||||| ||| Sbjct 25666 CTTTGCACCGAGATCGTCGAGT 25687 >seq1110 Length=58492 Score = 91.5 bits (100), Expect = 2e-12 Identities = 145/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 165750 GCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCACCGC 165809 ||||||||| || | | |||||| ||||||| |||||||||||| |||| | |||||| Sbjct 25998 GCAGACCTGATCTCTTTGGGCGCGATCGGTGCCCGCACCACCGAGTCCCAGCTTCACCGC 25939 Query 165810 GAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGCGTG 165869 ||| | || || | ||| | | ||||| || | ||| ||| |||||||||||| | || Sbjct 25938 GAGCTCGCCTCAGGCCTGTCCTTCCCCATCGGTTACAAGAACGGCACCGACGGCAACCTG 25879 Query 165870 GCGACGGCCCTCGATGCCGTGCGCACTGCCGCCCAGCCACACACCTTTCTCTGGGTCGAC 165929 | ||| | || ||| | || | || | || || ||| ||| ||| | ||| | Sbjct 25878 ACCGTCGCCGTTGACGCCATCGGCGCCGCTTCACACCCCCACCGCTTCCTCGGTGTCACC 25819 Query 165930 GGCCAAGGTCGCATTGCTGCTCATCA 165955 || |||| ||||||| ||||| Sbjct 25818 AAGCAGGGTC---TTGCTGC-CATCA 25797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177651475756272