Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq833 251 9e-62 seq1127 96.9 4e-15 seq1079 86.0 8e-12 >seq833 Length=32517 Score = 251 bits (278), Expect = 9e-62 Identities = 579/865 (67%), Gaps = 19/865 (2%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || ||||||| || |||| ||||| |||||| |||||| | | ||||||| | Sbjct 25739 GGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACTGTACTCGACG 25680 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | |||||| || ||| || |||| ||||| ||||||||||||||| Sbjct 25679 ATCTCGGTGCAAAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTG 25620 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| |||||||| ||||||||| |||| | || ||||| ||||| | | |||||| Sbjct 25619 TTGCAAGCATCCTTATAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATG 25560 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 111465 || | ||| | | || | | || | |||| || |||| || |||||| |||||| Sbjct 25559 GCATACCAGAGCTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCTCCTGCTCGTA 25504 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 ||| ||| || || || ||||| ||||| | || | || || || |||| || Sbjct 25503 CTTCACGTAAAGAGCGTCGAACTCATCACCGTAAACATCAGCCAGGCCGGGGGCCTCGTT 25444 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || ||||| || | ||| | ||| ||||||| ||||||||||| || || ||| | Sbjct 25443 GGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGAGT 25384 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 ||||| | | ||||| || | ||| |||| || | ||| ||||| || | Sbjct 25383 CCACAAAGCGTAGAAGAGGTCACGGGCGCGAACCTCCTCCTTACCGTGGTTCTTGCGCAG 25324 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 111699 || |||||||| | || ||| |||||||||||||| || |||| || | || Sbjct 25323 ATCGAGGAACTCGAAGACATCGGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACCAGG 25264 Query 111700 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759 | ||| | ||| |||| | |||||||| || ||| || || ||||| ||||| Sbjct 25263 GCGCTTGTTA---CCACCTTGGTCCACATAGCGTGCGGTGTTATTGAACACGCGCAGCAT 25207 Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819 |||| |||||| | || || || || || | ||| ||| | || | | Sbjct 25206 AGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAAT 25147 Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 |||| | || || ||||| ||||| ||| ||||| ||||| | | || Sbjct 25146 GCGGTGGACATTCAAACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAG 25087 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 ||| | |||||||| | || |||| | | | | | ||||||||| | | Sbjct 25086 AGTATCGTAGATACCCTCAATGCTGTCCGCGCTCACGTCAACCAGGAAGCAAGACGCAAG 25027 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-T 111998 ||| ||| || ||| | |||||||| || || || | |||||| |||| | || | | Sbjct 25026 CTGAGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGA-ACTTCT 24968 Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058 |||||||| || ||||||||| | | | ||||| || || ||||| || |||| | Sbjct 24967 GGGACATCAAGTGGTATGTCTCAATGGCCTTTTCAATATCCTCGCCGTGAATTCCGACAG 24908 Query 112059 CGACCCGCATGAACATGTACTGTGG 112083 | || ||||| | || || ||| || Sbjct 24907 CAACACGCATCAGCAAGTGCTGAGG 24883 >seq1127 Length=175000 Score = 96.9 bits (106), Expect = 4e-15 Identities = 301/463 (65%), Gaps = 30/463 (6%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| ||||| |||||||| |||||||||||||| ||| | ||| ||| ||||| Sbjct 150449 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 150508 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAATGGGTGGCACCCCAACTTGTTT--GAGG---- 122484 ||||| || || || | ||||| || | || | ||||| |||| Sbjct 150509 AAGTCGAAGGGGTTGGTAGCGTT--------GTAGTACTTC---TTGTTGCCGAGGGCCA 150557 Query 122485 -----AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGA 122539 || || || | || |||||||||||||| ||||| || |||||||| || | Sbjct 150558 CCAGCAGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCATGCCAA 150617 Query 122540 TGAGGTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCA 122599 || || || || ||||| | |||| | | ||| || | || ||||| | Sbjct 150618 GAAGACCGCAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCGACAA 150677 Query 122600 CGATGGCGTG---GATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTT-GAAGAGCTCC 122655 |||| | || ||| || ||| | || | | | | || ||||||| Sbjct 150678 TGATGTCCTGAACGATC-TTGGGGTCGGGGCGGTGGTTC---ATGTGGGAGAAGAGCAGG 150733 Query 122656 ACGGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGA 122715 || || || |||||||||||| || || || || || || || ||||| ||| Sbjct 150734 CAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGA 150793 Query 122716 CCTGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAG 122775 || ||||| | || |||||||||| ||| | || | | |||||| |||||||||||| Sbjct 150794 CCGGGCATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAG 150853 Query 122776 ATACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 |||||||| ||| || || |||| || || ||||||| Sbjct 150854 ATACCCTCAACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 150896 >seq1079 Length=57471 Score = 86.0 bits (94), Expect = 8e-12 Identities = 211/313 (67%), Gaps = 8/313 (3%) Strand=Plus/Plus Query 11630 GCATCAATCTCATCAATGAAGACAATACA-TGGTTGATTTTCGCGGGCGATTTCAAAGAG 11688 ||||| || ||||||||||||| || || || || | ||| ||||| | | ||||| Sbjct 45224 GCATCGATTTCATCAATGAAGATGATGCAGGGGGTGTTCTTC-CGGGCATTGGCGAAGAG 45282 Query 11689 ATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAG-C 11747 |||||| || | || ||| |||||||||||||| || || || | | || | | Sbjct 45283 ATCGCGGACACGGGAGGGACCGACACCAACAAACATTTCGACGAATTCGGAACCACTGAC 45342 Query 11748 ACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCG 11807 ||| | ||| || || |||||||| || |||| || || | ||||| || | Sbjct 45343 ACTATA-GAAAGGCACGCCAGATTCACCGGCAGTGGCCTTAGCAAGCAATGTCTTACCAG 45401 Query 11808 TACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCCAAAATA 11865 |||| || ||| | ||||| || || ||||| ||||| ||||| |||| | | Sbjct 45402 TACCGGGGGGACCTGAGAGAATAGCACCACGGGGAATCTTAGCACCCAGCTTCTCGA--A 45459 Query 11866 TCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAAT 11925 | |||||||||| ||| || |||| || | ||| | ||||| |||| || Sbjct 45460 GCGTTCGGGTTGCTGGAGGAAGCTAACAAATTCCATGATCTCAACCTTGGCTTCGTCCAT 45519 Query 11926 CCCCTCAACATCA 11938 ||| |||||||| Sbjct 45520 GCCCGCAACATCA 45532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628018999737600