Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq833 174 2e-38 seq1127 141 1e-28 >seq833 Length=32517 Score = 174 bits (192), Expect = 2e-38 Identities = 557/856 (65%), Gaps = 15/856 (2%) Strand=Plus/Minus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || ||||||| || ||||| || || |||| |||||| | || ||||||| | Sbjct 25739 GGGAGGGCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGAGCACTGTACTCGACG 25680 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || ||||| | ||| || || ||| || |||| |||||| || || ||| || Sbjct 25679 ATCTCGGTGCAAAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTG 25620 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || |||||||| || |||||| | || | || ||||| || |||| || |||||| Sbjct 25619 TTGCAAGCATCCTTATAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATG 25560 Query 118884 GCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTT 118942 || | ||||| | || | || | | || | | | || ||||| | ||||||||| Sbjct 25559 GCATACCAGAGCTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCCTGCTCGTACTT 25501 Query 118943 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGG 119002 ||| || || || ||||| ||||| | || | || || || |||| | || Sbjct 25500 CACGTAAAGAGCGTCGAACTCATCACCGTAAACATCAGCCAGGCCGGGGGCCTCGTTGGG 25441 Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062 ||||||||| | ||| | ||| ||||||| |||||||||||||| || || |||| Sbjct 25440 GCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGAGTCCA 25381 Query 119063 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 119122 | || ||||||| || || |||| | || || | || || || |||| || Sbjct 25380 CAAAGCGTAGAAGAGGTCACGGGCGCGAACCTCCTCCTTACCGTGGTTCTTGCGCAGATC 25321 Query 119123 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 119182 | || || | || ||| |||||||| || |||||||| | || | | || | | Sbjct 25320 GAGGAACTCGAAGACATCGGCGTGCCATGGCTCCAGGTAGATAGCAAAGGCACC---AGG 25264 Query 119183 ACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGG 119236 || |||| | |||| ||||| | || ||| || || || || ||||| || Sbjct 25263 GCGCTTGTTACCACCTTGGTCCACATAGCGTGCGGTGTTATTGAACACGCGCAGCATAGG 25204 Query 119237 AATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATC 119296 || ||||| | ||| ||| || || || | ||| ||| | || | | Sbjct 25203 AACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCG 25144 Query 119297 GTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACT 119356 ||||| | || ||| ||||| || || ||| ||||| || || | ||||| | Sbjct 25143 GTGGACATTCAAACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGT 25084 Query 119357 GCCGTAGATCCCATCGATCGAGT-CACCCTTATTTGCGATGAGGAAGCAGCTCGACATTT 119415 ||||||| || || || || | | || | | | | |||||||| || | | Sbjct 25083 ATCGTAGATACCCTCAATGCTGTCCGCGCTCACGT-CAACCAGGAAGCAAGACGCAAGCT 25025 Query 119416 GAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGG 119474 |||| ||| ||| | || ||||| ||||| || | ||||| |||| | || | ||| Sbjct 25024 GAGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGA-ACTTCTGG 24966 Query 119475 GACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAG 119534 |||||| || ||| ||||| | | | ||| || || |||||||| |||| | Sbjct 24965 GACATCAAGTGGTATGTCTCAATGGCCTTTTCAATATCCTCGCCGTGAATTCCGACAGCA 24906 Query 119535 ACCCGCATAAACATGT 119550 || ||||| | || || Sbjct 24905 ACACGCATCAGCAAGT 24890 >seq1127 Length=175000 Score = 141 bits (156), Expect = 1e-28 Identities = 307/457 (67%), Gaps = 18/457 (4%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| || || ||||||||||||||||| ||||| || ||| | ||| |||||| Sbjct 150449 TAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATG 150508 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGCTGGC-ACTCCAATCTGTTTGAGG 129841 || || || ||||| | | ||| | ||| || | | | | | || Sbjct 150509 AAGTCGAAGGGGTTGGTAGCGTTGTAGTACTTCTTGTTGCCGAGGGCCACC------AGC 150562 Query 129842 AGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGG 129901 || || || | |||| ||||||||||||| ||||| || ||||||||| || | || Sbjct 150563 AGGCGGTCAGCGACGAACTCAATGTACTCGCACATCAGCTTGGAGTTCATGCCAAGAAGA 150622 Query 129902 TTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATG 129961 || || || ||||| | |||| ||| ||| ||| | || || || | |||| Sbjct 150623 CCGCAGGGAAGAGCGTCAGTCAGGAACTCCTGCTCGATGCCGACGGCCTCGACAATGATG 150682 Query 129962 GCGTGAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACG---GCA 130018 | |||| | ||| | | | || | | | || |||||| || | || Sbjct 150683 TCCTGAACGATCTTGGGGTCGGGGCGGTGGTTCATGTGGGAGAAGAG---CAGGCAAGCG 150739 Query 130019 AACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGC 130078 || || |||||||||||||||||| |||||||| || || ||||| ||||| ||| Sbjct 150740 AAGTCAGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAAGTGAGACCGGGC 150799 Query 130079 ATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCC 130138 || | || |||||||||| |||||| || | |||||||| ||||||||||| ||| Sbjct 150800 ATCAAGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCGGAGAAGAAGATACCC 150859 Query 130139 TCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 || ||| ||||| |||| |||||| ||| |||| Sbjct 150860 TCAACAGCGGCGAAGGCAACCAGACGCGAAGCGAAGG 150896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618422398391360