Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq433 122 5e-23 >seq433 Length=43892 Score = 122 bits (134), Expect = 5e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||||| ||||||||| || ||||||||||| || ||||| || || ||||| || || Sbjct 2114 AGACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGT 2055 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || || ||||| || || || | |||||| ||||| || || | ||||||| Sbjct 2054 CCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCCCTCC 1995 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || ||| ||| || |||| ||| | || |||||| ||||| || |||| || Sbjct 1994 TTATCT-TGAATCTTGCTTTTCACGTTGTCGATAGTGTCTGAACTCTCAACCTCCAGTGT 1936 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || || || || || || ||||| || ||||| Sbjct 1935 GATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1897 Score = 87.8 bits (96), Expect = 1e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| || |||||||||||||| || || || | ||||||||||| || || || || Sbjct 1631 TCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAG 1572 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 || | ||||| |||||||| || | |||||||||||| Sbjct 1571 ATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 1534 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575 ||||| || |||||||||||||| || || || | ||||||||||| || || || || Sbjct 1859 TCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAG 1800 Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTC 34613 || | ||||| ||||| || || | |||||||||||| Sbjct 1799 ATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTC 1762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314723247969848