Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1641 174 4e-38 seq433 172 1e-37 seq801 122 2e-22 seq833 107 4e-18 >seq1641 Length=3225 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 ||||| || |||||||| || |||||||||||||||| |||||| | ||||| |||||| Sbjct 3224 AGGTGCAGTGTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGC 3165 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || |||||||||||||| || ||||| || |||| ||| |||||||||||||| Sbjct 3164 TGCTTACCAGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATT 3105 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || || || || ||||| || || | |||||||| || ||||| ||||| || Sbjct 3104 TTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCA 3045 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || | |||||| Sbjct 3044 GTAAGGGTCTTGACGAAGATCTGCAT 3019 >seq433 Length=43892 Score = 172 bits (190), Expect = 1e-37 Identities = 160/203 (79%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 || || ||| ||| || |||||||| || |||| ||| || | |||||| ||||||||| Sbjct 2099 TGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCATCCTCCAGCTGC 2040 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || ||||||||||| || || |||||||| |||| ||| ||||| || || ||||| Sbjct 2039 TTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATTCCCTCCTTATCTTGAATCTTG 1980 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||||||||| ||||| ||||| || || |||||||| || ||||| |||||||| || Sbjct 1979 CTTTTCACGTTGTCGATAGTGTCTGAACTCTCAACCTCCAGTGTGATAGTCTTTCCAGTC 1920 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||||| | ||||| Sbjct 1919 AAGGTCTTGACAAAGATTTGCAT 1897 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| ||||| || || |||||||||||||| | ||||| | |||||| Sbjct 1880 AGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCT 1821 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||||||||||||||| ||||| || ||||| || |||| ||| ||||||||| Sbjct 1820 TCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCC 1761 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || || || ||||| || || | |||||||| || ||||| ||| Sbjct 1760 TGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 1701 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 1700 TTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 1669 Score = 167 bits (184), Expect = 5e-36 Identities = 157/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| ||||| || || |||||||||||||| | ||||| | |||||| Sbjct 1652 AGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCT 1593 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||||||||||||||| ||||| || ||||| || |||| ||| ||||||||| Sbjct 1592 TCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCC 1533 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || || || ||||| || || | |||||||| || ||||| ||| Sbjct 1532 TGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 1473 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 || || || || |||||||| Sbjct 1472 TTGCCGGTCAGGGTCTTTAC 1453 Score = 154 bits (170), Expect = 3e-32 Identities = 148/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| ||||| || || ||||||||||| |||| | ||| | |||||| Sbjct 1370 AGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAGTCCGACAAGGTGCGACCATCT 1311 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||||||||||||||| ||||| || ||||| || |||| ||| ||||||||| Sbjct 1310 TCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCC 1251 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| || || || || ||||| || || | |||||||| || ||||| ||| Sbjct 1250 TGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 1191 Query 211083 TTTCCCGTGA 211092 || || |||| Sbjct 1190 TTGCCAGTGA 1181 >seq801 Length=61771 Score = 122 bits (134), Expect = 2e-22 Identities = 137/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || ||||||||||| |||||||| Sbjct 22502 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 22443 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| || |||||||| |||| || ||||| ||||||||||| || || || ||| Sbjct 22442 AGGCGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTGGTCTTGACATTGTCG 22383 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 22382 ATGGTGTC---GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 22326 Query 211104 AA 211105 || Sbjct 22325 AA 22324 >seq833 Length=32517 Score = 107 bits (118), Expect = 4e-18 Identities = 190/276 (69%), Gaps = 6/276 (2%) Strand=Plus/Minus Query 178093 GTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||| ||||| ||||| || ||| ||||| || || |||||||| | || Sbjct 25641 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTATAGAGCATGAAGGGGTTACC 25585 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 ||||| || ||| |||||||| || ||| |||| ||| || || ||||| Sbjct 25584 AGTCTCAGTCTGGGCCTCGAGAATGGCATACCAGAGCTTCTGAGCCTTGATGGTCTTGCG 25525 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 | | || || | ||||||||| ||| || | ||||| || || || ||||| Sbjct 25524 GCCACGGCCCTCCTGCTCGTACTTCACGTAAAGAGCGTCGAACTCATCACCGTAAACATC 25465 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329 | | || ||||| ||||| |||||||||||||| |||| | ||||| ||| || || Sbjct 25464 AGCCAGGCCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACG 25405 Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 ||||||||||| || | ||||| | || ||||| Sbjct 25404 CTTCATGAAGAGATCGGGAGTCCACAAAGCGTAGAA 25369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159127405692440