Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq1641 93.3 4e-14 seq433 86.0 5e-12 >seq1641 Length=3225 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/206 (71%), Gaps = 6/206 (3%) Strand=Plus/Minus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| || || || |||||||| | ||| || || | || || ||||| Sbjct 3221 TGCAGTGTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGCTGC 3162 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT- 39200 || || || || ||||| ||||||||||||| ||| | | ||| |||||| |||||| Sbjct 3161 TTACCAGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTG 3102 Query 39201 --CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258 || || | |||| | |||||||| ||||| || || | ||||| | || || Sbjct 3101 GACT-TTACATTGTCG--ATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCA 3045 Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || ||||| ||||| Sbjct 3044 GTAAGGGTCTTGACGAAGATCTGCAT 3019 >seq433 Length=43892 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153 || || || || |||||||| | || || || | || ||||| || ||||| || || Sbjct 1859 TCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAG 1800 Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT---CTGTTTGAGC 39210 || || ||||||||||||| ||| | | ||| |||||| |||||| || || | Sbjct 1799 ATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACT-TTACATT 1741 Query 39211 GTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270 |||| | |||||||| ||||| || || | ||||| | || || || || || || Sbjct 1740 GTCG--ATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTG 1683 Query 39271 ACAAAGATTTGCAT 39284 || ||||| ||||| Sbjct 1682 ACGAAGATCTGCAT 1669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429536930695928