Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09-
20] 1,656 sequences; 28,072,829 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq1641 93.3 4e-14
seq433 86.0 5e-12
>seq1641
Length=3225
Score = 93.3 bits (102), Expect = 4e-14
Identities = 146/206 (71%), Gaps = 6/206 (3%)
Strand=Plus/Minus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||| ||| || || || |||||||| | ||| || || | || || |||||
Sbjct 3221 TGCAGTGTGGACTCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGCTGC 3162
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT- 39200
|| || || || ||||| ||||||||||||| ||| | | ||| |||||| ||||||
Sbjct 3161 TTACCAGCGAAGATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTG 3102
Query 39201 --CTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCC 39258
|| || | |||| | |||||||| ||||| || || | ||||| | || ||
Sbjct 3101 GACT-TTACATTGTCG--ATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCA 3045
Query 39259 GTCAGCGTTTTAACAAAGATTTGCAT 39284
|| || || || || ||||| |||||
Sbjct 3044 GTAAGGGTCTTGACGAAGATCTGCAT 3019
>seq433
Length=43892
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/194 (71%), Gaps = 6/194 (3%)
Strand=Plus/Minus
Query 39094 TCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAAT 39153
|| || || || |||||||| | || || || | || ||||| || ||||| || ||
Sbjct 1859 TCCTTCTGGATGTTATAATCTGAGAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAG 1800
Query 39154 ATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTT---CTGTTTGAGC 39210
|| || ||||||||||||| ||| | | ||| |||||| |||||| || || |
Sbjct 1799 ATGAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACT-TTACATT 1741
Query 39211 GTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTA 39270
|||| | |||||||| ||||| || || | ||||| | || || || || || ||
Sbjct 1740 GTCG--ATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTG 1683
Query 39271 ACAAAGATTTGCAT 39284
|| ||||| |||||
Sbjct 1682 ACGAAGATCTGCAT 1669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429536930695928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |