Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq433 176 9e-39 seq801 138 2e-27 seq1641 114 3e-20 seq1654 111 3e-19 seq1127 100 6e-16 >seq433 Length=43892 Score = 176 bits (194), Expect = 9e-39 Identities = 178/229 (78%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || |||| ||| | ||||| || || |||||||||||||| | Sbjct 2124 ACCACCACGCAGACGCAGCACCAAATGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 2065 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || |||||||| || || || || || ||||| | ||| || |||||| || Sbjct 2064 AAGAGTACGTCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGG 2005 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| |||||||| ||||| ||||| |||||| ||| | ||||||||||| ||| || | Sbjct 2004 AATTCCCTCCTTATCTTGAATCTT-GCTTTTCACGTTGTCGATAGTGTCTGAACTCTCAA 1946 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || || ||||| ||||| || ||||| ||||| || || || ||||| Sbjct 1945 CCTCCAGTGTGATAGTCTTTCCAGTCAAGGTCTTGACAAAGATTTGCAT 1897 Score = 136 bits (150), Expect = 8e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | ||| ||| || |||||||| || || | Sbjct 1896 ACCACCACGTAGACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGA 1837 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || ||||| || || || ||||| | || || ||||| || Sbjct 1836 GAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGGG 1777 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| ||||| || | ||||| | |||||||| || | || || Sbjct 1776 AATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAAC 1717 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 1716 CTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGAAGATCTGCAT 1669 Score = 127 bits (140), Expect = 4e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | ||| ||| || |||||||| || || | Sbjct 1668 ACCACCACGTAGACGAAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAATCTGA 1609 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || ||||| || || || ||||| | || || ||||| || Sbjct 1608 GAGGGTGCGGCCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCCGGGGG 1549 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| ||||| || | ||||| | |||||||| || | || || Sbjct 1548 AATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAAC 1489 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 || || ||||| ||||| || |||| ||||| |||| Sbjct 1488 CTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTTACGA 1451 Score = 114 bits (126), Expect = 3e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG- 282930 ||||||||| ||||| || || || || | ||| ||| || |||||||| ||||| | Sbjct 1386 ACCACCACGGAGGCGGAGGACGAGGTGAAGTGTGGATTCCTTCTGGATGTTATAGTCCGA 1327 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| ||||| ||||| || ||||| || || || ||||| | || || ||||| | Sbjct 1326 CAAG-GTGCGACCATCTTCAAGTTGCTTGCCTGCGAAGATGAGGCGCTGCTGGTCGGGGG 1268 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| ||||||||||| ||||| || | ||||| | |||||||| || | || | Sbjct 1267 GAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTGTCGATAGTATCGCTGGACTCAA 1208 Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075 | || || ||||| ||||| || || Sbjct 1207 CCTCAAGGGTGATGGTCTTGCCAGT 1183 >seq801 Length=61771 Score = 138 bits (152), Expect = 2e-27 Identities = 138/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||||||||| || || || ||||| |||||| Sbjct 22502 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 22443 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | || || |||||| |||||||||||||| || |||||||| | || || | ||| Sbjct 22442 AGGCGCTGCTGGTCAGGGGGAATACCCTCCTTATCCTGGATCTTGGTCTTGACATTGTCG 22383 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | ||||| ||||| || || ||||||||||||| ||||| ||||| Sbjct 22382 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 22324 >seq1641 Length=3225 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||| || || | ||| || ||||||||||| || || || || || ||| Sbjct 3209 TCCTTCTGGATGTTATAATCCGAAAGGGTACGGCCATCCTCCAGCTGCTTACCAGCGAAG 3150 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 || | || || ||||| ||||| ||||||||||| ||||| || | ||||| | Sbjct 3149 ATAAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTGTCCTGGATTTTGGACTTTACATTG 3090 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 |||||||| || | || || || || ||||| ||||| || || | ||||| ||| Sbjct 3089 TCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACG 3030 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 3029 AAGATCTGCAT 3019 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | || || || ||||||||||| || | Sbjct 3018 ACCACCACGTAGACGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 2959 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || || || ||||||| || || |||||| || Sbjct 2958 AAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCAGGGGG 2899 Query 282992 AATACCCTCCTTGTCT 283007 |||||||||||||||| Sbjct 2898 AATACCCTCCTTGTCT 2883 >seq1654 Length=1850 Score = 111 bits (122), Expect = 3e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | || || || ||||||||||| || | Sbjct 1539 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 1598 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || || || ||||||| || || |||||| || Sbjct 1599 AAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGCTGGTCAGGGGG 1658 Query 282992 AATACCCTCCTTGTCT 283007 |||||||||||||||| Sbjct 1659 AATACCCTCCTTGTCT 1674 >seq1127 Length=175000 Score = 100 bits (110), Expect = 6e-16 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | |||||| |||| ||| ||||| | |||||||| | | || ||| Sbjct 150653 AGGAGTTCCTGACTGACGCTCTTCCCTGCGGTCTTCTTGGCATGAACTCCAAGCTGATGT 150594 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 | | || || || ||||| ||||| || | | ||||| || || || |||| | Sbjct 150593 GCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACT 150534 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||| | | |||||||||| || |||||| ||| || || || || || |||| Sbjct 150533 ACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACT 150474 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| ||||||||| | || || || | | ||||||| Sbjct 150473 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCCGGTGT 150434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046716990811024