Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20griseofulvum_20[genbank_20GCA_5F001735785.1_202016-09- 20] 1,656 sequences; 28,072,829 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq433 141 2e-28 seq1641 127 5e-24 seq801 109 1e-18 seq833 91.5 4e-13 >seq433 Length=43892 Score = 141 bits (156), Expect = 2e-28 Identities = 152/201 (76%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || ||||| || ||||| || ||||| || || |||||| Sbjct 1900 CAAATCTTTGTCAAGACCTTGACTGGAAAGACTATCACACTGGAGGTTGAGAGTTCAGAC 1959 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| ||| |||||||| || || || ||||| || || |||||||| Sbjct 1960 ACTATCGACAACGTGAAAAGCAAGATTCAAGATAAGGAGGGAATTCCCCCTGACCAGCAG 2019 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || |||||| | |||||| | || || ||| || Sbjct 2020 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGACGTACTCTTTCGGACTACAACATC 2079 Query 178104 CAAAAAGAATCAACACTGCAT 178124 || || || || |||||| Sbjct 2080 CAGAAGGAGAGCACCCTGCAT 2100 Score = 120 bits (132), Expect = 7e-22 Identities = 146/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || || || || || || || |||||||| ||||| || | || || |||| Sbjct 1451 TCGTAAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCG 1510 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | || || || || || |||||||| || ||||| || ||||||||||| || || | Sbjct 1511 ACAATGTAAAGTCCAAAATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGCCTCA 1570 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 ||||||| || || || || |||||||| | || || | ||||||||| |||| || | Sbjct 1571 TCTTCGCAGGCAAGCAACTTGAAGATGGCCGCACCCTCTCAGATTATAACATCCAGAAGG 1630 Query 178111 AATCAACACTGCATCTTGT 178129 |||| ||||| || || || Sbjct 1631 AATCCACACTTCACCTCGT 1649 >seq1641 Length=3225 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||| ||||| || | || Sbjct 3022 CAGATCTTCGTCAAGACCCTTACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGAT 3081 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || || || |||||||| || ||||| || || |||||||| Sbjct 3082 ACTATCGACAATGTAAAGTCCAAAATCCAGGACAAGGAGGGAATTCCCCCCGACCAGCAG 3141 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || ||||| | || ||| | ||||||||| || Sbjct 3142 CGCCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGTACCCTTTCGGATTATAACATC 3201 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || || || |||||||| || Sbjct 3202 CAGAAGGAGTCCACACTGCACCT 3224 >seq801 Length=61771 Score = 109 bits (120), Expect = 1e-18 Identities = 140/192 (73%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 22323 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 22379 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| || ||||| ||||| ||||| || || || || || || |||||||| || Sbjct 22380 CATCGACAATGTCAAGACCAAGATCCAGGATAAGGAGGGTATTCCCCCTGACCAGCAGCG 22439 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || ||||||||||| || |||||||| ||||| | || || ||| || ||| |||| Sbjct 22440 CCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 22499 Query 178106 AAAAGAATCAAC 178117 || | || ||| Sbjct 22500 GAAGGTATGAAC 22511 >seq833 Length=32517 Score = 91.5 bits (100), Expect = 4e-13 Identities = 131/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 214204 AGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTTGGCTCTTCCCTCGTTTTCG 214263 |||||| || |||||| | || ||||| | | ||| | | | ||||| | ||| Sbjct 25565 AGAATGGCATACCAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCCTGCTCG 25506 Query 214264 TACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATCAAGACCGGGAGCCTCG 214323 ||||| | ||||||| || || || |||||| |||||| | || ||||| |||||| Sbjct 25505 TACTTCACGTAAAGAGCGTCGAACTCATCACCGTAAACATCAGCCAGGCCGGGGGCCTCG 25446 Query 214324 TTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTTCATGAAAAGGTCGGAA 214383 ||||||||||| || |||| | || || || || | |||||||| || |||| | Sbjct 25445 TTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGA 25386 Query 214384 GTCCA 214388 ||||| Sbjct 25385 GTCCA 25381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203705659833264