Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F000769765.1_202014-10-28] 1,632 sequences; 30,164,421 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq818 105 8e-18 seq1386 102 1e-16 >seq818 Length=422577 Score = 105 bits (116), Expect = 8e-18 Identities = 313/481 (65%), Gaps = 4/481 (1%) Strand=Plus/Plus Query 53786 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 53845 ||||| || | || | || |||||||| ||||| || |||||||| || || ||||| Sbjct 181740 ATGGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAG 181799 Query 53846 GGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATT 53905 || ||||||| ||| |||| | || | ||| || | ||||| ||||||| || Sbjct 181800 GGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATG 181859 Query 53906 ATAGATTTGTATCTCTTTTCTCTT--TCGTATAGTGTATACAATCGTTCAAACTCGTCTC 53963 | || | | | ||||| ||||| | | || | || ||||| || | Sbjct 181860 GTC--TTGCGACCACGGCCCTCTTGCTCGTACTGGGCGTAGAGAGCATCGAACTCATCAC 181917 Query 53964 CCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCAT 54023 | | |||| ||| ||| || ||| | || || | | | ||| || |||| Sbjct 181918 CATAGACATCAGCCAGTCCGGGGGCTTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGG 181977 Query 54024 CCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTC 54083 ||| || || ||||| |||||||| || |||| | ||| || || || | | | Sbjct 181978 CCTCAACGCGCTTCATGAAGAGATCGGGGGTCCACAAAGCGTAGAACAGGTCACGAGCAC 182037 Query 54084 TATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCC 54143 | ||||| || || ||||| |||||||||||| | | | ||| | |||| Sbjct 182038 GAACCTCCTCCTTGCCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCC 182097 Query 54144 ACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATC 54203 |||| |||| ||| |||| | | ||||| || ||||| || ||||| || | ||| | Sbjct 182098 ACGGCTCCAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGC 182157 Query 54204 TAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCC 54263 |||||||| ||| | || | | ||| |||| ||||| ||||| | || ||||| | Sbjct 182158 GTGCGGTGTTGTTAAACACACGGAGCATGGGAACGATACCGTTGGAGGAGCCGTTGGTTC 182217 Query 54264 C 54264 | Sbjct 182218 C 182218 >seq1386 Length=122134 Score = 102 bits (112), Expect = 1e-16 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || || || || || ||| ||||||||||| | | || | |||||||| Sbjct 114435 AACAGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 114376 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| || ||||| || |||||||| || ||||| || ||||| |||||||| ||| Sbjct 114375 AAAGTGAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCAAATGAGCCA 114316 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279 || ||||| || || || || || || || |||| Sbjct 114315 GAGAAGAAGATACCCTCGACAGCGGCGAATGCAA 114282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593709488079360