Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F000769765.1_202014-10-28] 1,632 sequences; 30,164,421 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq685 113 1e-19 seq818 87.8 4e-12 >seq685 Length=181473 Score = 113 bits (124), Expect = 1e-19 Identities = 272/410 (66%), Gaps = 35/410 (9%) Strand=Plus/Minus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 || ||||| |||| ||| |||| || ||||| ||||| || || || |||||||| || Sbjct 24929 CTCCCTCACATGCTCTTCTACGGACCCCCCGGCACAGGAAAAACATCCACCATCCTCGCC 24870 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCG--TGCTCGAGCTGAACG 254118 || ||| | |||| || ||| | | | | | | || | || |||||||||| Sbjct 24869 CTCGCCAAATCCCTCTTCGGCCCCGCC--CTTTACCGCTCCCGAATCCTAGAGCTGAACG 24812 Query 254119 CTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCA------ 254172 | || ||||| ||||| | | | | ||||||||||| | |||| |||| || Sbjct 24811 CCTCCGACGAGCGCGGTATCGGCATTGTCCGCGACAAAGTGAAGAATTTCGCCCGAGCCC 24752 Query 254173 AGATGTC----------GATTTCGTCGTTCCAACCCG-GC----------TGTCCGCCTT 254211 || | || | | | || || ||| || ||||| || | Sbjct 24751 AGCTCTCTCAACCAACCGGCCTAGACGCCGCATACCGTGCACAGTACCCATGTCCACCAT 24692 Query 254212 TCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCC 254271 ||||| || | ||||| |||||||| |||| ||||||| ||||| |||||||| || | Sbjct 24691 TCAAGATCATCATCCTCGACGAGGCCGACAGCATGACGCAAGACGCACAGTCCGCTCTGC 24632 Query 254272 GCCGAACGATGGAGAC--GCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGT 254329 |||| ||||||||||| || || | | ||||| || || || || |||||||| || Sbjct 24631 GCCGCACGATGGAGACATACAGTCGG--ATCACGCGGTTCTGTCTTGTTTGCAACTATGT 24574 Query 254330 GTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 || || |||| || || ||| ||| ||| |||||| ||||||| Sbjct 24573 CACGCGTATTATCGAGCCTCTCGCTAGTCGATGCAGCAAGTTCCGATTCA 24524 >seq818 Length=422577 Score = 87.8 bits (96), Expect = 4e-12 Identities = 116/161 (72%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336 || ||||| || |||| ||||||||||||| | || |||||||| || || ||| Sbjct 182119 TTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTTCCTCGATCTGCGGAAG 182060 Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396 ||| ||||||| ||| | | || |||||||| ||||||| ||||| | |||| Sbjct 182059 AACCACGGCAAGGAGGAGGTTCGTGCTCGTGACCTGTTCTACGCTTTGTGGACCCCCGAT 182000 Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 | |||||| ||||| ||||| |||| || ||||| || Sbjct 181999 CTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGGACACT 181959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073743947544576