Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F000769765.1_202014-10-28] 1,632 sequences; 30,164,421 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq818 132 6e-26 seq1386 93.3 5e-14 >seq818 Length=422577 Score = 132 bits (146), Expect = 6e-26 Identities = 664/1047 (63%), Gaps = 12/1047 (1%) Strand=Plus/Plus Query 63042 tgattactctttttGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63101 || |||||||| ||||| || |||||||| || || ||||| || ||||||| ||| || Sbjct 181758 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 181817 Query 63102 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCT 63160 |||| || | ||| || | ||||| | || ||||||| || | || | | | Sbjct 181818 TGAGCCTCGAGAATGGCGTACCAGA-GCTTCTGAGCCTTGATGGTC--TTGCGACCACGG 181874 Query 63161 TTCTCTT--TCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 63218 ||||| ||||| | | || | |||||||| || || | |||| ||| | Sbjct 181875 CCCTCTTGCTCGTACTGGGCGTAGAGAGCATCGAACTCATCACCATAGACATCAGCCAGT 181934 Query 63219 CTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63278 | || ||| | || || | | | ||| || |||| ||| || || ||||| Sbjct 181935 CCGGGGGCTTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATG 181994 Query 63279 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCT 63338 |||||||| || |||| | ||| || || || | | | | ||||| || || Sbjct 181995 AAGAGATCGGGGGTCCACAAAGCGTAGAACAGGTCACGAGCACGAACCTCCTCCTTGCCG 182054 Query 63339 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63398 ||||| |||||||||||| | | | ||| | |||||||| |||| ||| ||| Sbjct 182055 TGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATG 182114 Query 63399 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63458 || | | ||||| || ||||| || ||||| || | ||| | |||||||| ||| | Sbjct 182115 GCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGTGCGGTGTTGTTAAAC 182174 Query 63459 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCA 63518 || | | ||| |||| |||||||| || || ||||| || || || || Sbjct 182175 ACACGGAGCATGGGAACGATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCG 182234 Query 63519 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63578 | || ||||| | ||||| || || || || | || ||||| | || Sbjct 182235 GTAGCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCA 182294 Query 63579 CATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63638 || || | ||||| ||||| || || ||||| || || ||| || | | || Sbjct 182295 CAGGTCTTGAGAGTGTCGTAGATACCCTCAATGCTGTCCGCGCTCACGTCGACCAAGAAG 182354 Query 63639 CAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63698 || | || ||| | | | ||| | ||||| || | || || || ||||| || Sbjct 182355 CAAGATGCCAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTG 182414 Query 63699 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGA 63758 || | || | || | | | ||| |||||||| || || || ||| ||| Sbjct 182415 AAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGA 182474 Query 63759 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATT 63818 ||||| || || |||||||| | || |||||| || | ||| ||| ||| ||| || Sbjct 182475 ATTCCGACAGCAACACGCATGAGCAAGTGCTGGGGACGCTCAGCAACATTGCCGTTAATC 182534 Query 63819 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 63878 | | ||| || || | || || || || || ||||||| ||||| || Sbjct 182535 CGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGG 182594 Query 63879 TCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATA 63938 ||||| | ||| | || ||||||| || || || |||| || | | | || | Sbjct 182595 TCGTACACAATGGCGGAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTC 182653 Query 63939 C-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTC 63997 | |||| || || |||| | | || || || || || ||||| | | | | ||| Sbjct 182654 CTTTGAGATCATAGGAGCAGGCTTATTGTTCTTGGGGTTCACATAATGGTAGAGATCGGA 182713 Query 63998 CATCACTTCA-CTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTG 64055 || || || | | ||| | ||||| |||| |||||| || || || | ||| || | Sbjct 182714 GATGAC--CATCGAGAATTGCTTTTTAGTTTGCTTGTGGAGGTTGGAAACGGCGATACGT 182771 Query 64056 GCGGCTAGAATGGCATAATCCGGATGT 64082 || || |||||||| || || || ||| Sbjct 182772 GCAGCCAGAATGGCGTAGTCGGGGTGT 182798 >seq1386 Length=122134 Score = 93.3 bits (102), Expect = 5e-14 Identities = 113/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || || || || || ||| ||||||||||| | | || | ||||| || Sbjct 114435 AACAGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 114376 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || ||||| || ||||| || |||||||| || ||||| || ||||| || ||||| || Sbjct 114375 AAAGTGAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCAAATGAGCCA 114316 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726 || |||||||| || || || || || || |||| Sbjct 114315 GAGAAGAAGATACCCTCGACAGCGGCGAATGCAA 114282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629804751720960