Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F000769765.1_202014-10-28]
1,632 sequences; 30,164,421 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq818 132 6e-26
seq1386 93.3 5e-14
>seq818
Length=422577
Score = 132 bits (146), Expect = 6e-26
Identities = 664/1047 (63%), Gaps = 12/1047 (1%)
Strand=Plus/Plus
Query 63042 tgattactctttttGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63101
|| |||||||| ||||| || |||||||| || || ||||| || ||||||| ||| ||
Sbjct 181758 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 181817
Query 63102 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCT 63160
|||| || | ||| || | ||||| | || ||||||| || | || | | |
Sbjct 181818 TGAGCCTCGAGAATGGCGTACCAGA-GCTTCTGAGCCTTGATGGTC--TTGCGACCACGG 181874
Query 63161 TTCTCTT--TCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT 63218
||||| ||||| | | || | |||||||| || || | |||| ||| |
Sbjct 181875 CCCTCTTGCTCGTACTGGGCGTAGAGAGCATCGAACTCATCACCATAGACATCAGCCAGT 181934
Query 63219 CTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63278
| || ||| | || || | | | ||| || |||| ||| || || |||||
Sbjct 181935 CCGGGGGCTTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATG 181994
Query 63279 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCT 63338
|||||||| || |||| | ||| || || || | | | | ||||| || ||
Sbjct 181995 AAGAGATCGGGGGTCCACAAAGCGTAGAACAGGTCACGAGCACGAACCTCCTCCTTGCCG 182054
Query 63339 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63398
||||| |||||||||||| | | | ||| | |||||||| |||| ||| |||
Sbjct 182055 TGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATG 182114
Query 63399 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63458
|| | | ||||| || ||||| || ||||| || | ||| | |||||||| ||| |
Sbjct 182115 GCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGTGCGGTGTTGTTAAAC 182174
Query 63459 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCA 63518
|| | | ||| |||| |||||||| || || ||||| || || || ||
Sbjct 182175 ACACGGAGCATGGGAACGATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCG 182234
Query 63519 CTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 63578
| || ||||| | ||||| || || || || | || ||||| | ||
Sbjct 182235 GTAGCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCGGTCTTGGAGATCATGGCA 182294
Query 63579 CATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAA 63638
|| || | ||||| ||||| || || ||||| || || ||| || | | ||
Sbjct 182295 CAGGTCTTGAGAGTGTCGTAGATACCCTCAATGCTGTCCGCGCTCACGTCGACCAAGAAG 182354
Query 63639 CAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63698
|| | || ||| | | | ||| | ||||| || | || || || ||||| ||
Sbjct 182355 CAAGATGCCAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTG 182414
Query 63699 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGA 63758
|| | || | || | | | ||| |||||||| || || || ||| |||
Sbjct 182415 AAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGA 182474
Query 63759 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATT 63818
||||| || || |||||||| | || |||||| || | ||| ||| ||| ||| ||
Sbjct 182475 ATTCCGACAGCAACACGCATGAGCAAGTGCTGGGGACGCTCAGCAACATTGCCGTTAATC 182534
Query 63819 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 63878
| | ||| || || | || || || || || ||||||| ||||| ||
Sbjct 182535 CGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGG 182594
Query 63879 TCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATGGTAATA 63938
||||| | ||| | || ||||||| || || || |||| || | | | || |
Sbjct 182595 TCGTACACAATGGCGGAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTC 182653
Query 63939 C-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTC 63997
| |||| || || |||| | | || || || || || ||||| | | | | |||
Sbjct 182654 CTTTGAGATCATAGGAGCAGGCTTATTGTTCTTGGGGTTCACATAATGGTAGAGATCGGA 182713
Query 63998 CATCACTTCA-CTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTG 64055
|| || || | | ||| | ||||| |||| |||||| || || || | ||| || |
Sbjct 182714 GATGAC--CATCGAGAATTGCTTTTTAGTTTGCTTGTGGAGGTTGGAAACGGCGATACGT 182771
Query 64056 GCGGCTAGAATGGCATAATCCGGATGT 64082
|| || |||||||| || || || |||
Sbjct 182772 GCAGCCAGAATGGCGTAGTCGGGGTGT 182798
>seq1386
Length=122134
Score = 93.3 bits (102), Expect = 5e-14
Identities = 113/154 (73%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| || || || || || ||| ||||||||||| | | || | ||||| ||
Sbjct 114435 AACAGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 114376
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| ||||| || ||||| || |||||||| || ||||| || ||||| || ||||| ||
Sbjct 114375 AAAGTGAGACCAGGCATCAGACCACGCTTCTTCAGCCAGAAGATGGAGGCAAATGAGCCA 114316
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726
|| |||||||| || || || || || || ||||
Sbjct 114315 GAGAAGAAGATACCCTCGACAGCGGCGAATGCAA 114282
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629804751720960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |