Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F000769765.1_202014-10-28]
1,632 sequences; 30,164,421 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq264 116 9e-21
>seq264
Length=134157
Score = 116 bits (128), Expect = 9e-21
Identities = 139/189 (74%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || || |||||||| ||||||||||| || || || | ||||||
Sbjct 13165 AAGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTC 13224
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
|| || ||||| ||||| || || | | ||| ||||||||||| || || || || ||
Sbjct 13225 CTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATCCCCTCCTTGTC 13284
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||| ||||| | || || || || | ||||| || | || ||||| || || || ||
Sbjct 13285 CTGGATCTTCGACTTAACGTTGTCGATAGTATCACTGGACTCAACCTCGAGGGTGATGGT 13344
Query 104527 CTTACCAGT 104535
||| |||||
Sbjct 13345 CTTGCCAGT 13353
Score = 114 bits (126), Expect = 3e-20
Identities = 156/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | || || || || | ||| ||||||||||||||||| || |||
Sbjct 12862 ATACCACCACGTAGGCGGAGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAATCA 12921
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | |||||| || || || || || || || || || | ||| || ||||||
Sbjct 12922 GAAAGCGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGA 12981
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || || || || || ||||| | || ||||| || | ||| ||| | ||
Sbjct 12982 GGAATGCCCTCCTTGTCTTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCG 13041
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
||||| || ||||| ||||| || || || || || ||
Sbjct 13042 ACCTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTAAC 13079
Score = 107 bits (118), Expect = 4e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| ||||||||||| ||||| | ||||| || || || || |||
Sbjct 12439 GTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCCGTCCTCAAGCTGCTTGCCA 12498
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || | | ||| ||||||||||| || || || || || || ||||| | ||
Sbjct 12499 GCGAAGATCAAGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGGACTTC 12558
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| ||| | || ||||| || || || || || || || || ||
Sbjct 12559 ACGTTATCGATGGTGTCGGAGGACTCAACCTCAAGCGTGATTGTTTTTCCGGTCAGGGTC 12618
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 12619 TTGACGAAAATCTGCAT 12635
Score = 107 bits (118), Expect = 4e-18
Identities = 166/232 (72%), Gaps = 4/232 (2%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || || | ||| | || || || || | |||||||||||| || ||||| || ||
Sbjct 12634 ATACCACCACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCC 12693
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||| | || ||||| || || || || || || || || | ||| || ||||||
Sbjct 12694 GAGAGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGA 12753
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGT-T 104507
|| || || || |||||||| ||| ||||| || || || || | ||||| || | |
Sbjct 12754 GGAATGCCCTCCTTATCCTGGATC-TTGCTCTTGACGTTATCAATAGTATC-TGAGCTCT 12811
Query 104508 CTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
| || || || || || ||||| || || || || || || || ||||||||
Sbjct 12812 CGACTTCGAGCGTGATTGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 12863
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151374324259456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |