Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F000769765.1_202014-10-28] 1,632 sequences; 30,164,421 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq264 116 9e-21 >seq264 Length=134157 Score = 116 bits (128), Expect = 9e-21 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || |||||||| ||||||||||| || || || | |||||| Sbjct 13165 AAGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTC 13224 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || ||||| ||||| || || | | ||| ||||||||||| || || || || || Sbjct 13225 CTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATCCCCTCCTTGTC 13284 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| ||||| | || || || || | ||||| || | || ||||| || || || || Sbjct 13285 CTGGATCTTCGACTTAACGTTGTCGATAGTATCACTGGACTCAACCTCGAGGGTGATGGT 13344 Query 104527 CTTACCAGT 104535 ||| ||||| Sbjct 13345 CTTGCCAGT 13353 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || || || | ||| ||||||||||||||||| || ||| Sbjct 12862 ATACCACCACGTAGGCGGAGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAATCA 12921 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || || || | |||||| || || || || || || || || || | ||| || |||||| Sbjct 12922 GAAAGCGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGA 12981 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || || || || || || ||||| | || ||||| || | ||| ||| | || Sbjct 12982 GGAATGCCCTCCTTGTCTTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCG 13041 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547 ||||| || ||||| ||||| || || || || || || Sbjct 13042 ACCTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTAAC 13079 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| ||||||||||| ||||| | ||||| || || || || ||| Sbjct 12439 GTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCCGTCCTCAAGCTGCTTGCCA 12498 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | ||| ||||||||||| || || || || || || ||||| | || Sbjct 12499 GCGAAGATCAAGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCTTGGATCTTGGACTTC 12558 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||| | || ||||| || || || || || || || || || Sbjct 12559 ACGTTATCGATGGTGTCGGAGGACTCAACCTCAAGCGTGATTGTTTTTCCGGTCAGGGTC 12618 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 12619 TTGACGAAAATCTGCAT 12635 Score = 107 bits (118), Expect = 4e-18 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 || || || | ||| | || || || || | |||||||||||| || ||||| || || Sbjct 12634 ATACCACCACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCC 12693 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | || ||||| || || || || || || || || | ||| || |||||| Sbjct 12694 GAGAGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGA 12753 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGT-T 104507 || || || || |||||||| ||| ||||| || || || || | ||||| || | | Sbjct 12754 GGAATGCCCTCCTTATCCTGGATC-TTGCTCTTGACGTTATCAATAGTATC-TGAGCTCT 12811 Query 104508 CTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || || || || || ||||| || || || || || || || |||||||| Sbjct 12812 CGACTTCGAGCGTGATTGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 12863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151374324259456