Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F000769765.1_202014-10-28]
1,632 sequences; 30,164,421 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq544 179 6e-41
seq1019 161 2e-35
>seq544
Length=47449
Score = 179 bits (198), Expect = 6e-41
Identities = 189/246 (77%), Gaps = 2/246 (1%)
Strand=Plus/Plus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| ||||| || |||| ||||| | || || |||||||| |||||||||||||| || |
Sbjct 46823 CGCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAGGGAATCACCAAGCCGGCCA 46881
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550
|||| ||||| || |||||||| || ||||||||| |||| | || | || || ||||
Sbjct 46882 TCCGCCGTCTCGCCCGTCGTGGCGGTGTCAAGCGTATCTCCGCCATGATTTACGAGGAGA 46941
Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610
|| | ||| | ||| |||||| || |||| |||| ||| ||| || ||| ||||
Sbjct 46942 CCCGCGGTGTGCTCAAGTCCTTCCTTGAGTCCGTCATCCGTGACGCTGTCACCTACACCG 47001
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
|||||||||| |||||||| ||||||||| | || ||||||| || | || || || |
Sbjct 47002 AGCACGCTAAGCGTAAGACCGTCACCTCCCTTGACGTCGTCTACGCTCTCAAGCGCCAGG 47061
Query 16671 GCCGTA 16676
||||||
Sbjct 47062 GCCGTA 47067
Score = 95.1 bits (104), Expect = 2e-15
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 16522 GCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGAC 16581
|||| |||| | || | || || |||| || | ||| | ||| |||||| || |
Sbjct 47071 GCGTATCTCCGCCATGATTTACGAGGAGACCCGCGGTGTGCTCAAGTCCTTCCTTGAGTC 47130
Query 16582 CGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCAT 16641
||| |||| ||| ||| || ||| |||||||||||||| |||||||| ||||||||| |
Sbjct 47131 CGTCATCCGTGACGCTGTCACCTACACCGAGCACGCTAAGCGTAAGACCGTCACCTCCCT 47190
Query 16642 GGATATCGTCTATGCATTGAAACGTCAAGGCCGTA 16676
|| ||||||| || | || || || |||||||
Sbjct 47191 TGACGTCGTCTACGCTCTCAAGCGCCAGGGCCGTA 47225
>seq1019
Length=328132
Score = 161 bits (178), Expect = 2e-35
Identities = 188/251 (75%), Gaps = 2/251 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| ||| | | || || ||||| || ||||| |||||||| |||||
Sbjct 315440 GCCAAGCGCCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATTACCAAGCCCGCTAT 315382
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
|||||||| || || |||||||| ||||||||| |||| | || |||| || ||||
Sbjct 315381 TCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 315322
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
|||| ||| | |||| ||||||| || || |||| ||| ||| || ||| || ||
Sbjct 315321 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACCTACACTGA 315262
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||| || || ||||||||||| || | || | ||||| || | || || || ||
Sbjct 315261 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 315202
Query 16672 CCGTAAGATTT 16682
||||||| |||
Sbjct 315201 CCGTAAGTTTT 315191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79073707850976
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |