Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F000769765.1_202014-10-28] 1,632 sequences; 30,164,421 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq544 179 6e-41 seq1019 161 2e-35 >seq544 Length=47449 Score = 179 bits (198), Expect = 6e-41 Identities = 189/246 (77%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| ||||| || |||| ||||| | || || |||||||| |||||||||||||| || | Sbjct 46823 CGCCAAGCGCCACCGCAAGATCT-TGCGCGACAACATCCAGGGAATCACCAAGCCGGCCA 46881 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| || |||||||| || ||||||||| |||| | || | || || |||| Sbjct 46882 TCCGCCGTCTCGCCCGTCGTGGCGGTGTCAAGCGTATCTCCGCCATGATTTACGAGGAGA 46941 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| | ||| |||||| || |||| |||| ||| ||| || ||| |||| Sbjct 46942 CCCGCGGTGTGCTCAAGTCCTTCCTTGAGTCCGTCATCCGTGACGCTGTCACCTACACCG 47001 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 |||||||||| |||||||| ||||||||| | || ||||||| || | || || || | Sbjct 47002 AGCACGCTAAGCGTAAGACCGTCACCTCCCTTGACGTCGTCTACGCTCTCAAGCGCCAGG 47061 Query 16671 GCCGTA 16676 |||||| Sbjct 47062 GCCGTA 47067 Score = 95.1 bits (104), Expect = 2e-15 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 16522 GCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGAC 16581 |||| |||| | || | || || |||| || | ||| | ||| |||||| || | Sbjct 47071 GCGTATCTCCGCCATGATTTACGAGGAGACCCGCGGTGTGCTCAAGTCCTTCCTTGAGTC 47130 Query 16582 CGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCAT 16641 ||| |||| ||| ||| || ||| |||||||||||||| |||||||| ||||||||| | Sbjct 47131 CGTCATCCGTGACGCTGTCACCTACACCGAGCACGCTAAGCGTAAGACCGTCACCTCCCT 47190 Query 16642 GGATATCGTCTATGCATTGAAACGTCAAGGCCGTA 16676 || ||||||| || | || || || ||||||| Sbjct 47191 TGACGTCGTCTACGCTCTCAAGCGCCAGGGCCGTA 47225 >seq1019 Length=328132 Score = 161 bits (178), Expect = 2e-35 Identities = 188/251 (75%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| | | || || ||||| || ||||| |||||||| ||||| Sbjct 315440 GCCAAGCGCCACCGCAAGATTT-TGCGTGACAACATTCAGGGAATTACCAAGCCCGCTAT 315382 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 |||||||| || || |||||||| ||||||||| |||| | || |||| || |||| Sbjct 315381 TCGTCGTCTCGCACGCCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAGGAGAC 315322 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| ||| | |||| ||||||| || || |||| ||| ||| || ||| || || Sbjct 315321 CCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTCACCTACACTGA 315262 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||||||||| || | || | ||||| || | || || || || Sbjct 315261 GCACGCCAAGCGCAAGACTGTCACTTCTCTTGACGTTGTCTACGCTCTCAAGCGCCAGGG 315202 Query 16672 CCGTAAGATTT 16682 ||||||| ||| Sbjct 315201 CCGTAAGTTTT 315191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073707850976