Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F000769765.1_202014-10-28] 1,632 sequences; 30,164,421 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1386 159 7e-34 seq1598 113 9e-20 seq1476 84.2 4e-11 >seq1386 Length=122134 Score = 159 bits (176), Expect = 7e-34 Identities = 297/433 (69%), Gaps = 10/433 (2%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| || Sbjct 114693 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTA 114634 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || | | ||| || || || ||||| | Sbjct 114633 GCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGATCAGCAACGAACTCAATG 114574 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 |||| | |||||| | ||||||||||||| || || || |||| || ||| | | Sbjct 114573 TACTCGCACATCAGCTTGGAGTTCATGCCAAGCAGACCGCAGGGAAGAGCGTCAGTCAGG 114514 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCT--GTGCCAGAG 251797 || |||| |||| || | || ||||| | | ||| ||| |||| | | | | | Sbjct 114513 AACTCCTGTTCGATGCCGACGGCCTCGACAATAATATCCTGTACAACCTTAGGGTCGGGG 114454 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857 | | ||| || | ||| |||| || |||| | ||| |||||||||| Sbjct 114453 --CGGTGGTT---CATGTGGGAGAACAGCAGGCAAGCAAAGTCAGTGTGGAGACCCTCGT 114399 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 | ||| ||| | ||||||||| | | || |||||||||| ||||| ||| | |||| Sbjct 114398 CACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGACCACGCTTCTTCAGCC 114339 Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAA 251977 ||||||| | | ||| || |||||||| | | |||||||||| | ||||||| | Sbjct 114338 AGAAGATGGAGGCAAATGAGCCAGAGAAGAAGATACCCTCGACAGCGGCGAATGCAACCA 114279 Query 251978 GGCGCTCAGCAAA 251990 | ||| ||| || Sbjct 114278 GACGCGAAGCGAA 114266 >seq1598 Length=213194 Score = 113 bits (124), Expect = 9e-20 Identities = 158/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 ||||| || || || |||| |||||| ||||| || |||| ||||||||||| || Sbjct 180977 AGGTGTTGACCTTTGCAACTGCACTTTCTCCCTCGCTTACGGTGCCAAGATTCTGCTGAA 181036 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | || | ||| | ||||||||||| | || || |||||| |||||||||| || | Sbjct 181037 CCAGACTCACCTGCGCCTCAAGCGTGGCCAGCGTTACGGTCTCCTCGGTCCCAACGGTTC 181096 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 || |||| ||| || ||||| || || |||| ||||| || || || || || Sbjct 181097 CGGAAAGACCACCCTCATGCGTGCTATCAACAACGAGCAGCTCGAGGGCTTCCCCAAGAA 181156 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || |||||||| ||||||| Sbjct 181157 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTC 181198 >seq1476 Length=28026 Score = 84.2 bits (92), Expect = 4e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 279692 GCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCT 279751 ||| || || |||||||| ||||||||||||||||||||||| | | || ||||| || Sbjct 5845 GCCCGTGGGCTCTCTGTCCGGTGGTTGGAAGATGAAGCTGGCTTTGGCCCGTGCCATGCT 5904 Query 279752 ACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGAC 279800 | | || ||||| || ||||| || || || || |||||| ||||| Sbjct 5905 CCAGAAGGCTGATGTGCTCCTGCTGGACGAACCTACTAACCACTTGGAC 5953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027815307932512