Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F000769765.1_202014-10-28] 1,632 sequences; 30,164,421 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1551 132 5e-26 seq264 127 2e-24 seq667 98.7 1e-15 >seq1551 Length=100346 Score = 132 bits (146), Expect = 5e-26 Identities = 140/182 (77%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||| ||||| ||||||||| || ||||| | || ||||||||||| |||||||| | Sbjct 58022 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 58081 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 ||| |||||||||||| | || | || |||||| ||| |||||| |||||| ||| | Sbjct 58082 TCAGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGA-CGTTG 58140 Query 46524 -CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || ||||| | || ||||| || |||||||| || || || Sbjct 58141 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 58200 Query 46583 AA 46584 || Sbjct 58201 AA 58202 >seq264 Length=134157 Score = 127 bits (140), Expect = 2e-24 Identities = 169/235 (72%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| | ||| || | | |||||||||||| || | || |||||| || || || | Sbjct 12401 ATTACTGGCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTAT 12460 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 |||| || ||||| || |||| || ||||||||||| ||||| |||||||||||||| | Sbjct 12461 AGTCAGAAAGAGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGAT 12520 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538 | | || | || ||||||||| |||||| ||| | | | | |||||| | Sbjct 12521 CAGGAGGGATGCCCTCCTTGTCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGG 12580 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || || || | |||||| ||||| || ||||| || || || || || ||||| Sbjct 12581 ACTCAACCTCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 12635 Score = 109 bits (120), Expect = 6e-19 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || | || ||| | || || || | |||| || |||||||||||||| || || Sbjct 12637 CCACCACGTAGACGGAGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAG 12696 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 ||||| || | || || ||||||||||||||||| || | |||||||||||| | || Sbjct 12697 AGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 12756 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | || |||||| ||| |||||| |||||| | | | || || |||| || Sbjct 12757 ATGCCCTCCTTATCCTGGATCTTGCTCTTGACGTTATCAATAGTATCTGAGCTC---TCG 12813 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||| || || || ||||| || || || || || ||||| Sbjct 12814 ACTTCGAGCGTGATTGTCTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 12863 Score = 104 bits (114), Expect = 3e-17 Identities = 126/169 (75%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || |||||||| ||||| || || ||||| |||| || ||||| ||||| ||||| Sbjct 13186 CTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTCCTCAAGCTGTTTGCCAGCGAA 13245 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||||||||||||| || | || | | |||||||||| ||||||| ||| | ||| Sbjct 13246 GATCAAGCGCTGCTGATCAGGAGGGATCCCCTCCTTGTCCTGGATCTTCGACTT-AACGT 13304 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569 | | | || || || || || || || | |||||||| ||||| || Sbjct 13305 TGTCGATAGTATCACTGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 13353 Score = 102 bits (112), Expect = 9e-17 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || || |||||||| || || || ||||| |||| || ||||||||||||||||| Sbjct 12901 TCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAG 12960 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||||||| | || | || ||||||||| |||||| ||| | | Sbjct 12961 ATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCTTGGATCTTGGACTTCACATTG 13020 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| ||| || || || | || ||||| || || ||||| || ||||| Sbjct 13021 TCGATGGTGTCGGACGACTCGACCTCAAGGGTAATGGTCTTTCCGGTCAGGGTCTTAAC 13079 >seq667 Length=243885 Score = 98.7 bits (108), Expect = 1e-15 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || |||||||| | || |||||||||||||||||||| Sbjct 211713 CTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 211654 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| |||||||||||| | || | | ||||||||| Sbjct 211653 GATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 211615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565226869136640