Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F000769765.1_202014-10-28]
1,632 sequences; 30,164,421 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq1386 149 9e-30
seq818 113 6e-19
>seq1386
Length=122134
Score = 149 bits (164), Expect = 9e-30
Identities = 218/303 (72%), Gaps = 13/303 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || |||||||| ||||| || |||||||| |||||| |||| |
Sbjct 113814 GATCTGGCAAATGTAC-AAGAAGGCCGAAGCCTCTTTCTGGACCGCTGAGGAGATCGATC 113872
Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887
|| || |||| ||||| ||| ||| |||||| ||||| | |||
Sbjct 113873 TCTCTAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTC 113928
Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947
||| |||||||| ||||| || |||||| ||| || ||||| ||||||||| |
Sbjct 113929 ATCTCCCACGTCCTGGCCTTCTT-CGCCGCTTCCGACGGTATCGTCAACGAGAACCTTGT 113987
Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007
|| || || | ||||||||| | || ||||| |||| || || || ||||||||
Sbjct 113988 CGAGCGTTTCAGTTCAGAGGTCCAGATCCCCGAGGCCCGTTGCTTCTATGGCTTCCAGAT 114047
Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067
| || || ||||||||||| || || ||||| || || ||||||||||| | |||||
Sbjct 114048 CATGATGGAGAACATCCACTCCGAGACATACTCCCTGCTCATCGACACCTATATTAAGGA 114107
Query 1456068 CCC 1456070
||
Sbjct 114108 GCC 114110
Score = 105 bits (116), Expect = 1e-16
Identities = 182/259 (70%), Gaps = 4/259 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|| || ||||||||||||| ||||| | ||||| | | || | || || |
Sbjct 114479 ATTATTGTCGAGGCCGTCGGCATCGAACAGGAGTTCCTGACTGACGCTCTTCCCTGCGGT 114538
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| | ||||||||| ||| ||| |||||| |||||||||| || || || || ||||
Sbjct 114539 CTGCTTGGCATGAACTCCAA-GCTGATGTGCGAGTACATTGAGTTC-GTTGCTGATCGCC 114596
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
|||| | ||| |||||| | ||||| ||||| | ||||||| ||| | |||
Sbjct 114597 TGCTGGTGGCCCTCGGCAACA-AGAAGTACTACAACGCTACCAACCCCTTCGACTTCATG 114655
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
|||| ||||| || | |||||||||||||| |||||| || || || || |||
Sbjct 114656 GAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 114715
Query 1456762 AAGGCCGGCGTCACCGCCA 1456780
||||| || |||| ||||
Sbjct 114716 AAGGCTGGTGTCATGGCCA 114734
>seq818
Length=422577
Score = 113 bits (124), Expect = 6e-19
Identities = 291/438 (66%), Gaps = 18/438 (4%)
Strand=Plus/Minus
Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855
||||||| || ||||||||| ||||||||| |||||||||||||| || || | |
Sbjct 182135 CAAGCGCCCTGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTT 182076
Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915
|| || || |||||||||||||||| |||| || || || | | || ||
Sbjct 182075 CCTCGATCTGCGGAAGAACCACGGCAAGGA----GGAGGTTCGTGCTCGTG--ACCTGTT 182022
Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975
|||| ||||||| ||| || || ||| ||| | | | || | | |||||| |
Sbjct 182021 CTACGCTTTGTGGACCCCCGATCTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGGAC 181962
Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035
||||| ||||| ||| || ||||| ||| || |||||| | | || || ||
Sbjct 181961 ACTCTTCTGCCCCAACGAAGCCCCCGGACTGGCTGATGTCTATGGTGATGAGTTCGATGC 181902
Query 262036 CCTCTATG---AGNNNNNNNNNNNNNNNNNNNNNNCGCG-GACCGTCGTGCCCGCACGAC 262091
||||| | || ||| |||| || | | || ||
Sbjct 181901 TCTCTACGCCCAGTACGAGCAAGAGGGCCGTGGT-CGCAAGACCATCAAGGCT-CA-GA- 181846
Query 262092 AGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACA 262151
|| |||||| |||||| ||| ||| || | ||||| || | |||| |||| ||||||
Sbjct 181845 AGCTCTGGTACGCCATTCTCGAGGCTCAGACTGAGACTGGTAACCCCTTCATGCTCTACA 181786
Query 262152 AGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAA 262209
|||| || |||| || || |||||| |||||||||| |||| || ||| ||||
Sbjct 181785 AGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACCATTCG-CAGCT-CCAA 181728
Query 262210 CCTGTGCACCGAGATCGT 262227
||||||||||||||||||
Sbjct 181727 CCTGTGCACCGAGATCGT 181710
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177653790600384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |