Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F000769765.1_202014-10-28]
1,632 sequences; 30,164,421 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq264 131 1e-25
>seq264
Length=134157
Score = 131 bits (144), Expect = 1e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
|||||| | ||||||||||||| ||||||||| |||||| ||||||||||| || ||
Sbjct 12408 GCCGCCACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGA 12467
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
||| || || |||| ||||| || || || || || || || ||||| || || || ||
Sbjct 12468 AAGAGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGG 12527
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657
| |||||||||||| |||| || | || ||| || || ||||| | ||| |
Sbjct 12528 GATGCCCTCCTTGTCTTGGATC-TTGGACTTCACGTTATCGATGGTGTCGGAGGACTCAA 12586
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | || || ||||| ||||| | || || || |||||||||||
Sbjct 12587 CCTCAAGCGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 12635
Score = 91.5 bits (100), Expect = 9e-14
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 34516 TCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAAT 34575
|| ||||| || || ||||| || || || || | |||||||| || || ||||| ||
Sbjct 12673 TCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCTTCAAGCTGCTTGCCGGCGAAG 12732
Query 34576 ATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT 34635
|| | ||||| ||||| || || | |||||||| || |||||| | || ||| |
Sbjct 12733 ATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCCTGGATCTTGC-TCTTGACGTT 12791
Query 34636 AA-AATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCAC 34694
| ||| || ||| |||||| ||||| | || || || || ||||| | || || ||
Sbjct 12792 ATCAATAGTATCTGAGCTCTCGACTTCGAGCGTGATTGTCTTTCCGGTCAGGGTCTTGAC 12851
Query 34695 AAAAATCTGCAT 34706
|||||||||||
Sbjct 12852 GAAAATCTGCAT 12863
Score = 82.4 bits (90), Expect = 5e-11
Identities = 104/143 (73%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | || || | |||| ||||||||| ||| || || || ||||| || |||
Sbjct 13151 CCGCCACGGAGGCGAAGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAA 13210
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| ||||| ||||| || || || || || ||||| || || || ||
Sbjct 13211 AGCGTGCGACCGTCCTCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGG 13270
Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622
| ||||||||||| ||||||
Sbjct 13271 ATCCCCTCCTTGTCCTGGATCTT 13293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314723340028256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |