Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F000769765.1_202014-10-28] 1,632 sequences; 30,164,421 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq264 197 3e-45 seq1551 122 2e-22 seq818 116 9e-21 seq667 116 9e-21 >seq264 Length=134157 Score = 197 bits (218), Expect = 3e-45 Identities = 171/212 (81%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||||||||| || || ||||||||||| || ||||||| || || | |||||| Sbjct 12652 AGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCT 12711 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||||||||| || ||||||||||||| || ||||| ||| Sbjct 12712 TCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 12771 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || || || ||||| || || ||||| ||||| ||| Sbjct 12772 TGGATCTTGCTCTTGACGTTATCAATAGTATCTGAGCTCTCGACTTCGAGCGTGATTGTC 12831 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || ||||| || || | |||||| Sbjct 12832 TTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 12863 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| ||||||||||| || || |||||||| || | ||| || | || || || Sbjct 12427 ACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGTACGGCCGTCCTCA 12486 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 ||||||||||| |||||||| | ||| || || |||||||| | || |||||||| ||| Sbjct 12487 AGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATGCCCTCCTTGTCTTGG 12546 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| |||||||| ||||||||||| ||| |||||||| || ||||| || ||| Sbjct 12547 ATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCAACCTCAAGCGTGATTGTTTTT 12606 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || ||||| || || | |||||| Sbjct 12607 CCGGTCAGGGTCTTGACGAAAATCTGCAT 12635 Score = 163 bits (180), Expect = 7e-35 Identities = 156/200 (78%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || || || ||||| || || || ||||| | ||| || | || || Sbjct 12880 AGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCGTCC 12939 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||||||||| || ||||||||||||| || |||||||| Sbjct 12940 TCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCT 12999 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||||||||| || || ||||| || || || ||| Sbjct 13000 TGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTAATGGTC 13059 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 ||||| || || ||||| || Sbjct 13060 TTTCCGGTCAGGGTCTTAAC 13079 Score = 158 bits (174), Expect = 3e-33 Identities = 149/190 (78%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| |||||||||||||| ||||| ||||| |||| ||| || | || || Sbjct 13166 AGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTCC 13225 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||| ||||| |||||||| | ||| || || |||||||| | || ||||||||| Sbjct 13226 TCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATCCCCTCCTTGTCC 13285 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| || ||| | ||||||||||| ||||| ||| Sbjct 13286 TGGATCTTCGACTTAACGTTGTCGATAGTATCACTGGACTCAACCTCGAGGGTGATGGTC 13345 Query 211083 TTTCCCGTGA 211092 || || |||| Sbjct 13346 TTGCCAGTGA 13355 >seq1551 Length=100346 Score = 122 bits (134), Expect = 2e-22 Identities = 137/182 (75%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || |||||||| || |||||||| Sbjct 58024 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 58083 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 ||||| || |||||||| |||| || ||||| ||||||||||| || ||||| ||| Sbjct 58084 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 58143 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 58144 ATGGTGTC---GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 58200 Query 211104 AA 211105 || Sbjct 58201 AA 58202 >seq818 Length=422577 Score = 116 bits (128), Expect = 9e-21 Identities = 192/276 (70%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 178093 GTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||| ||||| ||||| || ||| ||||| ||||| |||||||| | || Sbjct 181751 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAAGGGGTTACC 181807 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 ||||| |||||| |||||||| | ||| |||| ||| || || ||||| Sbjct 181808 AGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCG 181867 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 | || || | |||||||| |||||| | ||||| || ||||||||||| Sbjct 181868 ACCACGGCCCTCTTGCTCGTACTGGGCGTAGAGAGCATCGAACTCATCACCATAGACATC 181927 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329 | | || ||||| || || |||||||||||||| |||| | ||||| ||| || || Sbjct 181928 AGCCAGTCCGGGGGCTTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCG 181987 Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 ||||||||||| || | |||||| | || ||||| Sbjct 181988 CTTCATGAAGAGATCGGGGGTCCACAAAGCGTAGAA 182023 >seq667 Length=243885 Score = 116 bits (128), Expect = 9e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || ||||| || |||||||| ||||| | ||| || | ||||| Sbjct 211733 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCC 211674 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| ||||| || |||||||| |||| || |||||||| Sbjct 211673 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 211615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159127762131680