Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F000769765.1_202014-10-28] 1,632 sequences; 30,164,421 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq264 152 1e-31 seq1551 89.7 1e-12 >seq264 Length=134157 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || || ||||||||||||| ||||||||| | | ||| | |||||| Sbjct 12652 AGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCT 12711 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||||||||| || || ||||| || ||||| || ||||| || Sbjct 12712 TCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 12771 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || || || || |||||| | || || || | |||||| ||| Sbjct 12772 TGGATCTTGCTCTTGACGTTATCAATAGTATCTGAGCTCTCGACTTCGAGCGTGATTGTC 12831 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||| || || | ||| | ||||| Sbjct 12832 TTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 12863 Score = 145 bits (160), Expect = 2e-29 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| || |||||||| || | ||||||||| | | || | || || Sbjct 12880 AGGACAAGGTGGAGTGTCGATTCTTTCTGAATATTGTAATCAGAAAGCGTGCGACCGTCC 12939 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||||||||| || || ||||| || ||||| || ||||||||| Sbjct 12940 TCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCT 12999 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||||| || | || || || | || || ||| Sbjct 13000 TGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTAATGGTC 13059 Query 225682 TTGCCCGTCA 225691 || || |||| Sbjct 13060 TTTCCGGTCA 13069 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || |||||||||||||| || || || | || || || | | ||| Sbjct 12414 ACGCAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCAGAAAGAGT 12473 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| ||||||||||| | || || || || || || || || Sbjct 12474 ACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATGCC 12533 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||||||||||||||||| |||||| ||||||||||| |||| || || || | Sbjct 12534 CTCCTTGTCTTGGATCTTGGACTTCACGTTATCGATGGTGTCGGAGGACTCAACCTCAAG 12593 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| || || || |||| || || | ||| | ||||| Sbjct 12594 CGTGATTGTTTTTCCGGTCAGGGTCTTGACGAAAATCTGCAT 12635 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||||||||| ||||| |||| ||| || || | | || | || || Sbjct 13166 AGGACCAGGTGGAGAGTGGACTCTTTCTGGATATTATAGTCCGAAAGCGTGCGACCGTCC 13225 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||||||||| | || || || || || || || || |||||||| Sbjct 13226 TCAAGCTGTTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGAGGGATCCCCTCCTTGTCC 13285 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||| || || || || || || | ||||| ||| Sbjct 13286 TGGATCTTCGACTTAACGTTGTCGATAGTATCACTGGACTCAACCTCGAGGGTGATGGTC 13345 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 13346 TTGCCAGT 13353 >seq1551 Length=100346 Score = 89.7 bits (98), Expect = 1e-12 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 58024 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 58083 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || ||||| || ||||| || ||||| || |||||||| ||| || ||| Sbjct 58084 AGGCGCTGCTGGTCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGTCTTGACGTTGTCG 58143 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || || || | || || ||||| ||||||| || || | ||| Sbjct 58144 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 58202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192506264172608