Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq600 114 2e-20 seq510 111 2e-19 >seq600 Length=572387 Score = 114 bits (126), Expect = 2e-20 Identities = 319/485 (66%), Gaps = 12/485 (2%) Strand=Plus/Minus Query 53786 ATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAAT 53845 ||||| || | || | || |||||||| ||||| || |||||||| || || ||||| Sbjct 324626 ATGGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAG 324567 Query 53846 GGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATT 53905 || ||||||| ||| |||| | || | ||| || | ||||| ||||||| || Sbjct 324566 GGGTTACCAGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGAGCTTCTGAGCCTTGATG 324507 Query 53906 ATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATACA--ATCGTTCAAACTCG 53959 | || | | | ||||| ||||| | | ||| | | |||| ||||| Sbjct 324506 GTC--TTGCGACCACGGCCCTCTTGCTCGTACTTGGCGTAGAGAGCATCG----AACTCA 324453 Query 53960 TCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 54019 || || | |||| ||| ||| || ||| | || || | | | ||| || ||| Sbjct 324452 TCACCATAGACATCAGCCAGTCCGGGGGCTTCGTTAGGGCAGAAGAGTGTCCAGTCACCG 324393 Query 54020 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 54079 | ||| || || ||||| |||||||| || |||| | ||| || || || | | Sbjct 324392 TTGGCCTCAACGCGCTTCATGAAGAGATCGGGGGTCCACAAAGCGTAGAACAGGTCACGG 324333 Query 54080 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 54139 | | | ||||| || || ||||| |||||||||||| | | | ||| | Sbjct 324332 GCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCG 324273 Query 54140 TGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 54199 |||||||| |||| ||| |||| | | ||||| || ||||| || ||||| || | | Sbjct 324272 TGCCACGGCTCCAGGTAGATGGCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCAACG 324213 Query 54200 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTG 54259 || | |||||||| ||| | || | | ||| |||| ||||| ||||| | ||| ||| Sbjct 324212 TAGCGTGCGGTGTTGTTAAACACACGGAGCATGGGAACGATACCGTTGGAGGAACCGTTG 324153 Query 54260 GTCCC 54264 || || Sbjct 324152 GTTCC 324148 >seq510 Length=829487 Score = 111 bits (122), Expect = 2e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || || ||||| || ||| ||||||||||| | | || | |||||||| Sbjct 268469 AACAGCAGGCAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 268410 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| || ||||| ||||||||||| || ||||| || ||||| |||||||| ||| Sbjct 268409 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAATGAGCCA 268350 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279 || ||||| || || || || || || || |||| Sbjct 268349 GAGAAGAAGATACCCTCGACAGCGGCGAATGCAA 268316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593712798077280