Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq876 100 2e-16 >seq876 Length=62397 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||||||||| || |||||||| || || ||| |||| || | ||||||||| ||||| Sbjct 15018 TTCTTTCTGAATATTGTAGTCAGAAAGGGTGCGGCCGTCTTCAAGCTGCTTGCCGGCGAA 15077 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 || || |||||||||||| || | || ||||||||| ||||| ||| | || Sbjct 15078 GATAAGGCGCTGCTGGTCGGGAGGAATGCCCTCCTTGTCTTGGATCTTGGACTTCACATT 15137 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | | || | |||| ||| ||||| || | || ||||| || ||||| || || || || Sbjct 15138 GTCGATGGTGTCGGACGACTCGACCTCGAGGGTAATGGTCTTTCCGGTCAGGGTCTTAAC 15197 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || ||||| | ||| |||||| || || ||||| || || || |||| | || Sbjct 14770 AGGACAAGGTGAAGTGTAGATTCTTTTTGGATATTGTAATCCGAGAGAGTACGGCCATCT 14829 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || || ||||||||||| || | || |||||| || Sbjct 14830 TCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATGCCCTCCTTATCC 14889 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | ||| | ||||| || | |||||| || Sbjct 14890 TGGATCTTGCTCTTGACGTTGTCAATAGTATCTGAGCTCTCGACTTCGAGCGTGATTGTC 14949 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || ||||| || || || || || |||||||| Sbjct 14950 TTTCCGGTTAGGGTCTTGACGAAAATCTGCAT 14981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323067330196160