Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq442 109 1e-18
seq600 84.2 5e-11
>seq442
Length=352817
Score = 109 bits (120), Expect = 1e-18
Identities = 271/410 (66%), Gaps = 35/410 (9%)
Strand=Plus/Plus
Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060
|| ||||| |||| ||| |||| || ||||| ||||| || || || |||||||| ||
Sbjct 286062 CTCCCTCACATGCTCTTCTACGGACCCCCCGGCACAGGAAAAACATCCACCATCCTCGCC 286121
Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCG--TGCTCGAGCTGAACG 254118
|| ||| | |||| || ||| | | | | | | || | || ||||||||||
Sbjct 286122 CTCGCCAAATCCCTCTTCGGCCCCGCC--CTTTACCGCTCCCGAATCCTAGAGCTGAACG 286179
Query 254119 CTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCA------ 254172
| || ||||| ||||| | | | | ||||||||||| | |||| |||| ||
Sbjct 286180 CCTCCGACGAGCGCGGTATCGGCATTGTCCGCGACAAAGTGAAGAATTTCGCCCGAGCCC 286239
Query 254173 AGATGTC----------GATTTCGTCGTT-CCAACCCGGC----------TGTCCGCCTT 254211
|| | || | | | || || ||| || || || || |
Sbjct 286240 AGCTCTCTCAACCAACCGGCCTAGACGCCGCCTACCGTGCACAGTACCCATGCCCACCAT 286299
Query 254212 TCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCC 254271
||||| || | ||||| |||||||| |||| ||||||| ||||| |||||||| || |
Sbjct 286300 TCAAGATCATCATCCTCGACGAGGCCGACAGCATGACGCAAGACGCCCAGTCCGCTCTGC 286359
Query 254272 GCCGAACGATGGAGAC--GCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGT 254329
|||| ||||||||||| || || | | ||||| || || || || |||||||| ||
Sbjct 286360 GCCGCACGATGGAGACATACAGTCGG--ATCACGCGGTTCTGTCTTGTTTGCAACTATGT 286417
Query 254330 GTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
|| || |||| || || ||| ||| ||| |||||| |||||||
Sbjct 286418 CACGCGCATTATCGAGCCTCTCGCTAGTCGATGCAGCAAGTTCCGATTCA 286467
>seq600
Length=572387
Score = 84.2 bits (92), Expect = 5e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336
|| ||||| || |||| ||||||||||||| | || |||||||| || || |||
Sbjct 324247 TTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTTCCTCGATCTGCGGAAG 324306
Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396
||| |||| || ||| | | || |||||||| ||||||| ||||| | ||||
Sbjct 324307 AACCACGGTAAGGAGGAGGTTCGTGCCCGTGACCTGTTCTACGCTTTGTGGACCCCCGAT 324366
Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437
| |||||| ||||| ||||| |||| || ||||| ||
Sbjct 324367 CTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGGACACT 324407
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073750083448448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |