Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq442 109 1e-18 seq600 84.2 5e-11 >seq442 Length=352817 Score = 109 bits (120), Expect = 1e-18 Identities = 271/410 (66%), Gaps = 35/410 (9%) Strand=Plus/Plus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 || ||||| |||| ||| |||| || ||||| ||||| || || || |||||||| || Sbjct 286062 CTCCCTCACATGCTCTTCTACGGACCCCCCGGCACAGGAAAAACATCCACCATCCTCGCC 286121 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCG--TGCTCGAGCTGAACG 254118 || ||| | |||| || ||| | | | | | | || | || |||||||||| Sbjct 286122 CTCGCCAAATCCCTCTTCGGCCCCGCC--CTTTACCGCTCCCGAATCCTAGAGCTGAACG 286179 Query 254119 CTTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTTCTCCA------ 254172 | || ||||| ||||| | | | | ||||||||||| | |||| |||| || Sbjct 286180 CCTCCGACGAGCGCGGTATCGGCATTGTCCGCGACAAAGTGAAGAATTTCGCCCGAGCCC 286239 Query 254173 AGATGTC----------GATTTCGTCGTT-CCAACCCGGC----------TGTCCGCCTT 254211 || | || | | | || || ||| || || || || | Sbjct 286240 AGCTCTCTCAACCAACCGGCCTAGACGCCGCCTACCGTGCACAGTACCCATGCCCACCAT 286299 Query 254212 TCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCC 254271 ||||| || | ||||| |||||||| |||| ||||||| ||||| |||||||| || | Sbjct 286300 TCAAGATCATCATCCTCGACGAGGCCGACAGCATGACGCAAGACGCCCAGTCCGCTCTGC 286359 Query 254272 GCCGAACGATGGAGAC--GCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGT 254329 |||| ||||||||||| || || | | ||||| || || || || |||||||| || Sbjct 286360 GCCGCACGATGGAGACATACAGTCGG--ATCACGCGGTTCTGTCTTGTTTGCAACTATGT 286417 Query 254330 GTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 || || |||| || || ||| ||| ||| |||||| ||||||| Sbjct 286418 CACGCGCATTATCGAGCCTCTCGCTAGTCGATGCAGCAAGTTCCGATTCA 286467 >seq600 Length=572387 Score = 84.2 bits (92), Expect = 5e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336 || ||||| || |||| ||||||||||||| | || |||||||| || || ||| Sbjct 324247 TTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTTCCTCGATCTGCGGAAG 324306 Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396 ||| |||| || ||| | | || |||||||| ||||||| ||||| | |||| Sbjct 324307 AACCACGGTAAGGAGGAGGTTCGTGCCCGTGACCTGTTCTACGCTTTGTGGACCCCCGAT 324366 Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437 | |||||| ||||| ||||| |||| || ||||| || Sbjct 324367 CTCTTCATGAAGCGCGTTGAGGCCAACGGTGACTGGACACT 324407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073750083448448