Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15] 1,186 sequences; 28,597,635 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq600 136 5e-27 seq510 102 1e-16 >seq600 Length=572387 Score = 136 bits (150), Expect = 5e-27 Identities = 669/1053 (64%), Gaps = 24/1053 (2%) Strand=Plus/Minus Query 63042 tgattactctttttGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63101 || |||||||| ||||| || |||||||| || || ||||| || ||||||| ||| || Sbjct 324608 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 324549 Query 63102 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCT 63160 |||| || | ||| || | ||||| | || ||||||| || | || | | | Sbjct 324548 TGAGCCTCGAGAATGGCGTACCAGA-GCTTCTGAGCCTTGATGGTC--TTGCGACCACGG 324492 Query 63161 TTCTCTT--TCGTA--TAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63216 ||||| ||||| | | ||| | | |||||||| || || | |||| ||| Sbjct 324491 CCCTCTTGCTCGTACTTGGCGTAGAGAGCA--TCGAACTCATCACCATAGACATCAGCCA 324434 Query 63217 ATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63276 || || ||| | || || | | | ||| || |||| ||| || || |||| Sbjct 324433 GTCCGGGGGCTTCGTTAGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCA 324374 Query 63277 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTC 63336 | |||||||| || |||| | ||| || || || | | | | ||||| || | Sbjct 324373 TGAAGAGATCGGGGGTCCACAAAGCGTAGAACAGGTCACGGGCACGAACCTCCTCCTTAC 324314 Query 63337 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63396 | ||||| |||||||||||| | | | ||| | |||||||| |||| ||| | Sbjct 324313 CGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGA 324254 Query 63397 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63456 |||| | | ||||| || ||||| || ||||| || | ||| | |||||||| ||| Sbjct 324253 TGGCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGTGCGGTGTTGTTAA 324194 Query 63457 AAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTC 63516 | || | | ||| |||| |||||||| || ||| ||||| || || || | Sbjct 324193 ACACACGGAGCATGGGAACGATACCGTTGGAGGAACCGTTGGTTCCACCAATGTAAGAAC 324134 Query 63517 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63576 | | || ||||| | ||||| || || || || | || ||||| | | Sbjct 324133 CGGTAGCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCAGTCTTGGAGATCATGG 324074 Query 63577 CGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGT----TAAGT 63632 | || || | ||||||||||| || || ||||| || || ||| || ||| Sbjct 324073 CACAGGTCTTGAGAGTGTCATAGATACCCTCAATGCTGTCCGCGCTCACGTCGACCAAGA 324014 Query 63633 AGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63692 || || || || ||| | | | ||| | ||||| || | || || || ||| Sbjct 324013 AGCAAGATGCAAG----CTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCG 323958 Query 63693 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63752 || || || | || | || | | | ||| |||||||| || || || ||| Sbjct 323957 TGAGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCG 323898 Query 63753 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTG 63812 |||||||| || || |||||||| | || |||||| || | ||| ||| || | Sbjct 323897 CCGTGAATTCCGACAGCAACACGCATGAGCAAGTGCTGGGGACGCTCAGCAACATTTCCG 323838 Query 63813 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63872 || || | | ||| || || | || || || || || ||||||| ||| Sbjct 323837 TTAATCCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAG 323778 Query 63873 TCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATG 63932 || || ||||| | ||| | || ||||||| || || || |||| || | | | Sbjct 323777 TCACGGTCGTACACAATGGCGGAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTA 323719 Query 63933 GTAATAC-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 63991 || | | |||| || || |||| | | || || || || || ||||||| | | | Sbjct 323718 GTGTTCCTTTGAGATCATAGGAGCAGGCTTATTGTTCTTGGGGTTCACATAGTGGTAGAG 323659 Query 63992 ATCCTCCATCAC--TTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCT 64049 ||| || || || | ||| | ||||| |||| |||||| || || || | ||| Sbjct 323658 ATCGGAGATGACCATTGA--GAATTGCTTTTTAGTTTGCTTGTGGAGGTTGGAAACGGCG 323601 Query 64050 ATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64082 || | || || |||||||| || || || ||| Sbjct 323600 ATACGTGCAGCCAGAATGGCGTAGTCGGGGTGT 323568 >seq510 Length=829487 Score = 102 bits (112), Expect = 1e-16 Identities = 115/154 (75%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| || || ||||| || ||| ||||||||||| | | || | ||||| || Sbjct 268469 AACAGCAGGCAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 268410 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| || Sbjct 268409 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAATGAGCCA 268350 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726 || |||||||| || || || || || || |||| Sbjct 268349 GAGAAGAAGATACCCTCGACAGCGGCGAATGCAA 268316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629808262954080