Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20italicum_20[genbank_20GCA_5F001008395.1_202015-05-15]
1,186 sequences; 28,597,635 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq600 136 5e-27
seq510 102 1e-16
>seq600
Length=572387
Score = 136 bits (150), Expect = 5e-27
Identities = 669/1053 (64%), Gaps = 24/1053 (2%)
Strand=Plus/Minus
Query 63042 tgattactctttttGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATC 63101
|| |||||||| ||||| || |||||||| || || ||||| || ||||||| ||| ||
Sbjct 324608 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 324549
Query 63102 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCT 63160
|||| || | ||| || | ||||| | || ||||||| || | || | | |
Sbjct 324548 TGAGCCTCGAGAATGGCGTACCAGA-GCTTCTGAGCCTTGATGGTC--TTGCGACCACGG 324492
Query 63161 TTCTCTT--TCGTA--TAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCA 63216
||||| ||||| | | ||| | | |||||||| || || | |||| |||
Sbjct 324491 CCCTCTTGCTCGTACTTGGCGTAGAGAGCA--TCGAACTCATCACCATAGACATCAGCCA 324434
Query 63217 ATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCA 63276
|| || ||| | || || | | | ||| || |||| ||| || || ||||
Sbjct 324433 GTCCGGGGGCTTCGTTAGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCA 324374
Query 63277 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTC 63336
| |||||||| || |||| | ||| || || || | | | | ||||| || |
Sbjct 324373 TGAAGAGATCGGGGGTCCACAAAGCGTAGAACAGGTCACGGGCACGAACCTCCTCCTTAC 324314
Query 63337 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63396
| ||||| |||||||||||| | | | ||| | |||||||| |||| ||| |
Sbjct 324313 CGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGA 324254
Query 63397 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63456
|||| | | ||||| || ||||| || ||||| || | ||| | |||||||| |||
Sbjct 324253 TGGCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCAACGTAGCGTGCGGTGTTGTTAA 324194
Query 63457 AAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTC 63516
| || | | ||| |||| |||||||| || ||| ||||| || || || |
Sbjct 324193 ACACACGGAGCATGGGAACGATACCGTTGGAGGAACCGTTGGTTCCACCAATGTAAGAAC 324134
Query 63517 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 63576
| | || ||||| | ||||| || || || || | || ||||| | |
Sbjct 324133 CGGTAGCGCGAATGCGGTGGACGTTCAGACCGATACCGCCAGCAGTCTTGGAGATCATGG 324074
Query 63577 CGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGT----TAAGT 63632
| || || | ||||||||||| || || ||||| || || ||| || |||
Sbjct 324073 CACAGGTCTTGAGAGTGTCATAGATACCCTCAATGCTGTCCGCGCTCACGTCGACCAAGA 324014
Query 63633 AGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 63692
|| || || || ||| | | | ||| | ||||| || | || || || |||
Sbjct 324013 AGCAAGATGCAAG----CTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCG 323958
Query 63693 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCAT 63752
|| || || | || | || | | | ||| |||||||| || || || |||
Sbjct 323957 TGAGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCG 323898
Query 63753 TGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTG 63812
|||||||| || || |||||||| | || |||||| || | ||| ||| || |
Sbjct 323897 CCGTGAATTCCGACAGCAACACGCATGAGCAAGTGCTGGGGACGCTCAGCAACATTTCCG 323838
Query 63813 TTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 63872
|| || | | ||| || || | || || || || || ||||||| |||
Sbjct 323837 TTAATCCGAAGAAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAG 323778
Query 63873 TCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCATG 63932
|| || ||||| | ||| | || ||||||| || || || |||| || | | |
Sbjct 323777 TCACGGTCGTACACAATGGCGGAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTA 323719
Query 63933 GTAATAC-TTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAA 63991
|| | | |||| || || |||| | | || || || || || ||||||| | | |
Sbjct 323718 GTGTTCCTTTGAGATCATAGGAGCAGGCTTATTGTTCTTGGGGTTCACATAGTGGTAGAG 323659
Query 63992 ATCCTCCATCAC--TTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCT 64049
||| || || || | ||| | ||||| |||| |||||| || || || | |||
Sbjct 323658 ATCGGAGATGACCATTGA--GAATTGCTTTTTAGTTTGCTTGTGGAGGTTGGAAACGGCG 323601
Query 64050 ATTCTGGCGGCTAGAATGGCATAATCCGGATGT 64082
|| | || || |||||||| || || || |||
Sbjct 323600 ATACGTGCAGCCAGAATGGCGTAGTCGGGGTGT 323568
>seq510
Length=829487
Score = 102 bits (112), Expect = 1e-16
Identities = 115/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| || || ||||| || ||| ||||||||||| | | || | ||||| ||
Sbjct 268469 AACAGCAGGCAAGCGAAGTCAGTGTGGAGACCCTCGTCACGAGAGATCAGCTCGTTGGAG 268410
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| ||
Sbjct 268409 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCAAATGAGCCA 268350
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726
|| |||||||| || || || || || || ||||
Sbjct 268349 GAGAAGAAGATACCCTCGACAGCGGCGAATGCAA 268316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629808262954080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |